Sylvia atricapilla (blackcap): 136357789
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Entry
136357789 CDS
T10263
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136357789 (PCDH8)
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Protocadherins
136357789 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
136357789
NCBI-ProteinID:
XP_066169445
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All DBs
Position
2:complement(55882538..55886836)
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AA seq
998 aa
AA seq
DB search
MSPLRLLAAACLLALSRCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPHAQMALEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPTFAQSSVT
VELPEDAPPGSLLLDLDAADPDEGPNGEVVYAFSSQVPPEARRLFRLDPRSGHLTLEAAV
DYERTRTYELDVRAQDRGASPRAATCTVVVRLTDVNDNAPRISISALRGAASAAGVAYVS
EAAASESFVALVSATDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTVVKVRMVDQNDNPPVIIHPVLTNGTVEIGVSSKTSRDSMVAQIKARDADDG
ANAELTFAFLEESQQDLFTINPSTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQDIAKPSSWEGKTLQWDIPLIVIIVLAGSCTLLLVAIITIATTCNKR
KKGSNIKNNTALKDQIDISHLEKGHQEEGSQRGNMFEVRTFPSKTSFTSPDPSPAAEEIS
TTESGSDNTCLYEGQKRLRGQSGEQGFAATPSYNKEPAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLFPAPSTRYLGPQTETTEKA
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctagctgccgcctgcctgctggccctgtcccgctgcaagacg
gtgaggtatcgcaccgacgaggagggcgcgccgggcacggtgatcggtactctcgccgac
gagatgccggtgaaggcgccgggggagatgagctttcgcctgatgcggcagttcagcaac
agttcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaagcggggctg
gaccgggagcggctgtgcggccaagcccctcagtgtgtcctggccttcgacgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgtgacataaatgac
aatgcaccgcgcttcccccatgcccagatggcgctggaggtgtcggagagtgctgcaccc
ggcactcgcctcccgctggaggtggctgtggatgaggacgtgggctccaactccatccag
agcttccaggtctccctcaacagccacttcggtgtggaggcacagacacgggcagatggg
gcacgctgtgccgaccttgtcctgctccaggaactggaccgtgagcgccagccctcctac
accctggagctggtggccaaggatggtggcagtcctgcacgctcaggcacagcgactgtg
catgtccgcgtcctcgatgccaatgacaacagtccaacctttgcccagagctcagtcacg
gtggagttgcccgaggatgcaccgcccggctccctgctgctcgatctggatgctgccgac
cccgatgagggccccaatggtgaggtggtctatgccttcagcagccaggtgccccctgag
gcacggcggctcttccgcctcgatccgcgctcgggccacctcaccctggaggctgccgtg
gactacgagcgcacccgcacctacgagctggacgtgcgtgcccaggaccgcggcgccagc
ccccgtgctgccacctgcaccgtcgtcgtgcgcctcaccgacgtcaacgacaacgctccg
cgcatcagcatcagtgccctccgtggcgccgccagtgctgccggcgtggcctacgtcagc
gaggcggcagccagtgagagcttcgtggccctcgtcagcgccacagaccgcgactcgggc
gccaacgggcaggtgcgctgcagcctccgtggccatgaccacttcgccttgcagcgagcc
tacgaggacagctacatgatcgtcaccacggcggcactggaccgcgagcgcatccctgag
tacaacctcaccgtggtggctgaggacctgggctcgccgcccttcaagactgtccgccag
tacacagtgcgggtgagcgatgagaatgacaacgcgccgctcttcgccaagcctctctac
gaggtggctgtgcccgagaacaaccccccgggcgcctatatcaccacggtggtggctcgt
gaccctgatcttggccacaatggtaaggtcacctaccggctcctggagacacaggtcatg
ggggcccccatctccacctacgtctcggtggaccccgccaccggggccatctacgccctc
aggacattcaactatgagatcctcaagcagttggacctgaggattcaggccactgatggt
ggctccccacagctctccagcagcacagttgtcaaagtgagaatggtggaccagaacgac
aaccctcccgtcatcatccacccagtgctcaccaacgggactgtggaaattggtgtgtcc
agcaagacctcccgtgactccatggtggcccaaataaaagctcgagatgcagatgatggg
gccaatgctgagctcacctttgccttcctggaagagtcccagcaggaccttttcaccatc
aacccaagtactggggacattgtgctgaggggtgacctctctgaagagctgggacagcta
ttcaaggtcatcctcactgtgacagacaatggcagacctcccctggccacaactgccaca
gtcaacttcctggtgactgccactgctccatccagtatccaagacatagccaagcccagc
tcctgggaaggaaagactttgcagtgggacatccctctgatcgtgatcattgtcctggca
ggcagctgcaccctcctcctggtggctatcatcaccatcgccaccacctgcaacaagcgc
aagaaggggagcaacatcaaaaacaacactgccttgaaggaccaaatagatatctcccac
ctggagaaaggccatcaggaggagggcagccagagggggaacatgtttgaggtacgaacc
tttcccagcaaaacctctttcaccagccctgacccctctccagctgctgaagagatctcc
accactgagagcggcagtgacaacacttgcctctacgagggccagaagaggctgagggga
cagagtggggagcagggttttgctgccactccgagctacaacaaagagcctgctcccccc
gtggccatttggaagggacactccttcaacactatctccggccgggaggcagagaagttc
agtggcaaagacagcggcaaaggcgacagtgattttaacgacagcgactcggatatcagt
ggagatgccctgaagaaagatcttatcacacacatgcagaatggtctgtgggcatgcact
gctgaatgcaagatcctggggcactccgaccgctgctggagcccctcttgtggccgagcc
aaccctcacccctctccacatccttcagcacccctctccaccttctgcaagagcacgtcc
ttgcccagggatccccttcgcagggacaacttttatcaagcccaactgccgaaaacagtc
gggcttcagagcgtctatgagaaggtgctgcacagggactttgaccggacgatcacgctc
ctctccccgcctcgccctgcacggctccctgaccttcaggagatcggggtgccccttttc
ccggccccctcaaccagatacctgggtccccagaccgagacgactgagaaggcgtag
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