KEGG   Sylvia atricapilla (blackcap): 136357789
Entry
136357789         CDS       T10263                                 
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
  KO
K16499  protocadherin delta 2
Organism
sati  Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:sati00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sati04515]
    136357789 (PCDH8)
Cell adhesion molecules [BR:sati04515]
 Cadherins
  Protocadherins
   136357789 (PCDH8)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th TMEM154
Other DBs
NCBI-GeneID: 136357789
NCBI-ProteinID: XP_066169445
LinkDB
Position
2:complement(55882538..55886836)
AA seq 998 aa
MSPLRLLAAACLLALSRCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPHAQMALEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPTFAQSSVT
VELPEDAPPGSLLLDLDAADPDEGPNGEVVYAFSSQVPPEARRLFRLDPRSGHLTLEAAV
DYERTRTYELDVRAQDRGASPRAATCTVVVRLTDVNDNAPRISISALRGAASAAGVAYVS
EAAASESFVALVSATDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTVVKVRMVDQNDNPPVIIHPVLTNGTVEIGVSSKTSRDSMVAQIKARDADDG
ANAELTFAFLEESQQDLFTINPSTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQDIAKPSSWEGKTLQWDIPLIVIIVLAGSCTLLLVAIITIATTCNKR
KKGSNIKNNTALKDQIDISHLEKGHQEEGSQRGNMFEVRTFPSKTSFTSPDPSPAAEEIS
TTESGSDNTCLYEGQKRLRGQSGEQGFAATPSYNKEPAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLFPAPSTRYLGPQTETTEKA
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgagccccctgcggctgctagctgccgcctgcctgctggccctgtcccgctgcaagacg
gtgaggtatcgcaccgacgaggagggcgcgccgggcacggtgatcggtactctcgccgac
gagatgccggtgaaggcgccgggggagatgagctttcgcctgatgcggcagttcagcaac
agttcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaagcggggctg
gaccgggagcggctgtgcggccaagcccctcagtgtgtcctggccttcgacgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgtgacataaatgac
aatgcaccgcgcttcccccatgcccagatggcgctggaggtgtcggagagtgctgcaccc
ggcactcgcctcccgctggaggtggctgtggatgaggacgtgggctccaactccatccag
agcttccaggtctccctcaacagccacttcggtgtggaggcacagacacgggcagatggg
gcacgctgtgccgaccttgtcctgctccaggaactggaccgtgagcgccagccctcctac
accctggagctggtggccaaggatggtggcagtcctgcacgctcaggcacagcgactgtg
catgtccgcgtcctcgatgccaatgacaacagtccaacctttgcccagagctcagtcacg
gtggagttgcccgaggatgcaccgcccggctccctgctgctcgatctggatgctgccgac
cccgatgagggccccaatggtgaggtggtctatgccttcagcagccaggtgccccctgag
gcacggcggctcttccgcctcgatccgcgctcgggccacctcaccctggaggctgccgtg
gactacgagcgcacccgcacctacgagctggacgtgcgtgcccaggaccgcggcgccagc
ccccgtgctgccacctgcaccgtcgtcgtgcgcctcaccgacgtcaacgacaacgctccg
cgcatcagcatcagtgccctccgtggcgccgccagtgctgccggcgtggcctacgtcagc
gaggcggcagccagtgagagcttcgtggccctcgtcagcgccacagaccgcgactcgggc
gccaacgggcaggtgcgctgcagcctccgtggccatgaccacttcgccttgcagcgagcc
tacgaggacagctacatgatcgtcaccacggcggcactggaccgcgagcgcatccctgag
tacaacctcaccgtggtggctgaggacctgggctcgccgcccttcaagactgtccgccag
tacacagtgcgggtgagcgatgagaatgacaacgcgccgctcttcgccaagcctctctac
gaggtggctgtgcccgagaacaaccccccgggcgcctatatcaccacggtggtggctcgt
gaccctgatcttggccacaatggtaaggtcacctaccggctcctggagacacaggtcatg
ggggcccccatctccacctacgtctcggtggaccccgccaccggggccatctacgccctc
aggacattcaactatgagatcctcaagcagttggacctgaggattcaggccactgatggt
ggctccccacagctctccagcagcacagttgtcaaagtgagaatggtggaccagaacgac
aaccctcccgtcatcatccacccagtgctcaccaacgggactgtggaaattggtgtgtcc
agcaagacctcccgtgactccatggtggcccaaataaaagctcgagatgcagatgatggg
gccaatgctgagctcacctttgccttcctggaagagtcccagcaggaccttttcaccatc
aacccaagtactggggacattgtgctgaggggtgacctctctgaagagctgggacagcta
ttcaaggtcatcctcactgtgacagacaatggcagacctcccctggccacaactgccaca
gtcaacttcctggtgactgccactgctccatccagtatccaagacatagccaagcccagc
tcctgggaaggaaagactttgcagtgggacatccctctgatcgtgatcattgtcctggca
ggcagctgcaccctcctcctggtggctatcatcaccatcgccaccacctgcaacaagcgc
aagaaggggagcaacatcaaaaacaacactgccttgaaggaccaaatagatatctcccac
ctggagaaaggccatcaggaggagggcagccagagggggaacatgtttgaggtacgaacc
tttcccagcaaaacctctttcaccagccctgacccctctccagctgctgaagagatctcc
accactgagagcggcagtgacaacacttgcctctacgagggccagaagaggctgagggga
cagagtggggagcagggttttgctgccactccgagctacaacaaagagcctgctcccccc
gtggccatttggaagggacactccttcaacactatctccggccgggaggcagagaagttc
agtggcaaagacagcggcaaaggcgacagtgattttaacgacagcgactcggatatcagt
ggagatgccctgaagaaagatcttatcacacacatgcagaatggtctgtgggcatgcact
gctgaatgcaagatcctggggcactccgaccgctgctggagcccctcttgtggccgagcc
aaccctcacccctctccacatccttcagcacccctctccaccttctgcaagagcacgtcc
ttgcccagggatccccttcgcagggacaacttttatcaagcccaactgccgaaaacagtc
gggcttcagagcgtctatgagaaggtgctgcacagggactttgaccggacgatcacgctc
ctctccccgcctcgccctgcacggctccctgaccttcaggagatcggggtgccccttttc
ccggccccctcaaccagatacctgggtccccagaccgagacgactgagaaggcgtag

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