Sylvia atricapilla (blackcap): 136357993
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Entry
136357993 CDS
T10263
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
sati03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
136357993 (UPF3A)
mRNA cycle factors
P-body specific factors
136357993 (UPF3A)
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NCBI-GeneID:
136357993
NCBI-ProteinID:
XP_066169837
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Position
2:complement(88842223..88868147)
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AA seq
473 aa
AA seq
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MDAPPLQEAPRRHTDALPSPAPPPSPPSPLPPPLHPAPGKQREEKKTALSKVVIRRLPPC
LTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRDRFDGYVFID
NKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLENYCADEEKICANPEIL
LGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRR
EEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELASEKHKEKDEEADTEENKWDKSPGS
GSIKSKSLESSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDGRKHRTHYEFDK
FMRRNEEELKWGKGYNQDRGKKGNYSYSFTVEAVDKLGKEDKCDDMASKKERIRNKDRPA
MQLYQPGARIRTHMGPTSKTYDCSGKSFEDALDKKYEADNSPGASSEKTEEAE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggacgccccgccgctgcaggaggcgccgcgccgccacacggacgctctgccgagcccg
gcgccgccgccttccccgccgtccccgctgccgccgccgcttcacccggcgccgggaaaa
cagcgggaggagaagaaaacggcgctgagcaaagtggttattcgaaggcttcctccttgt
ctcaccaaggagcaactggaggaacagctgcatcctttacctgcccatgattattttgag
ttttgcactgctgatcccagcctttatcctcatctctactcaagagcatacattaacttt
agaaatcctgaggacatccttctttttagagatcgctttgatggctatgtcttcattgat
aataaaggtttggaatatcctgcagtggttgagtttgctccattccagaagatttcaaaa
aagaagctgaagaagaaagatgccaaagctgggagcattgaagatgatccagaatatagg
aaatttttagagaattactgtgctgatgaagagaagatctgtgccaatcctgagattctt
ttgggagagattgaggccaaaacaagggaactcattgctagaagaacaacaccccttttg
gaatatattaaaaatagaaaattagaaaagcagagaatacgagaagagaaaagagaagaa
cgaaggcggagagaattggagaagaaacgtttgcgggaggaagagaaaaggaagcgcaga
gaagaagaaagacgtaaaagaaaagaagtggagaaacaaaagaagatttctgagaaagaa
ataaggatcaagcttctcaagaagcctgaaaaaggagatgaactggccagtgaaaagcac
aaagaaaaagatgaagaagctgacactgaggaaaacaaatgggataaatcacctggatct
ggaagtataaaatccaaatctttggagagctcactaaaagaacttaaggaaaagtcacaa
aatgatagtgacaaagagcaaagagatttggagagaagatttcgagaaaaagaacctgaa
agacaaaggtatcgactggatgatggcagaaagcatagaactcactatgagtttgacaag
tttatgagaaggaatgaagaagagctgaagtgggggaaaggatacaatcaagacagagga
aagaaagggaactacagctacagcttcactgtggaggcagtagacaaactgggtaaagag
gacaagtgtgatgacatggcatccaaaaaggagcgcataagaaataaggatcgtccagcc
atgcagttgtaccagccaggagctcgcatccgaacacatatggggcctacaagtaaaacc
tatgactgcagtgggaaatcctttgaagatgctcttgataaaaagtatgaggcagataat
tcacctggagctagttctgaaaagactgaagaagcagaataa
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