Sylvia atricapilla (blackcap): 136358119
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Entry
136358119 CDS
T10263
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136358119 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sati03032
]
136358119 (POLA1)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
136358119 (POLA1)
DNA replication proteins [BR:
sati03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
136358119 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
YqbF
Motif
Other DBs
NCBI-GeneID:
136358119
NCBI-ProteinID:
XP_066170082
LinkDB
All DBs
Position
2:102401905..102584820
Genome browser
AA seq
1495 aa
AA seq
DB search
MSDSGSFAASRSRRERKNRRGQQEALERLKKAKAGEKLKYEVEEFTGIYDEIDEDEYSKM
VRDRQDDDWIVDDDGTGYVEDGREIFDEDLDDDALGSNKKGKGGRTSTIDKKNVKKSVVS
KPNTIKSMFMASAGKKNTDKTVDLSKDDLLGDILQDISAETVQLSPPPVIMLKRRRSAGV
PLNPFSVKSQTSKVITPVSKKAPAHVRKETLPPASFHPKHPNYTAQSVNISENEDTKHVQ
KPIEKEGIVKAVGEKATKALPDDDQGMMDFDEEDFDEPMEAEHVETIPETAESLKRDNEI
EKKETEQLESEKKETSILSCSLPGLSCWDRIDEDEADLVAAEVQLDPNLLPLVKGESDDQ
VLRFYWLDAYEDQFSQPGVVFLFGKVWIESATTYVSCCVTVKNIERTVYLLPRETEIDLS
TGKETETPVTIMSVFKEFNDSISPKYKIMKFKSKKVEKYYAFEIPDVPAKSEYLEIKYSA
ECPRLPQDLKGQTFSHVFGTNTSSLELLLMNQKIKGPCWLEIKNPQPSNQPLSWCKVEAV
VMKPGLVNVVKDLSPPPPLVVMSFSMKTIQNPKTHQNEVVALAALVHQKFPLDKAPPQPP
FQTHFCAVSKPSDCIFPYDFKEAVKKKNAKIEIAATERTLLGFFLAKIHKIDPDVVVGHN
IYGFDLEVLLQRINLCKVPHWSKIGRLRRSNMPKLGGRGGFAERNAACGRMICDVEISAK
ELIRCKSYHLPELVHQILKTEKITILPEEIRNMYSDSPRLLFLLENTWTDAKFILQIMCE
LNVLPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYIVPDKQVFKKPPQKLVD
EDEDFEDQNKSKIGKKKAAYAGGLVLDPKIGFYDKFVLLLDFNSLYPSIIQEYNICFTTV
QRLSSEAQKRAEAEEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLY
LQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVI
YGDTDSIMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALT
VEPTGDGKYVTKQELKGLDIVRRDWCDLAKQTGNYVIGQILSDQPRDIIVENIQRRLIEI
GENVASGQIPTNQFEINKALTKDPQDYPDKKTLPHVHVAMWINSHGGRKVKAGDTVSYII
CQDGSDLSAGQRAYAPEQLKKQENLTIDTQYYLSQQIHPVVARICEPIEGIDSVLIATWL
GLDPSQFRVHHHYHKDENDALVGGPAQLTDEEKYRDCERFKFCCLKCGTENIYDNVFDGS
GRFIEPSLQSCSKTECEEPPFSYVVQMSNKLLLDIRRYLRKYYCGWLICEDPTCQNRTRR
LPLSFSRSGPVCQACRRAVLRPEYSDKALYTQLCFYRYIFDVDYAMDKVVTEEEKEYLRK
KKHFPLRREVAEAYKRLKSTVDKCLSMSGYSEVNLGKLFTGSIGRSVGESSNERQ
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactctggaagttttgcagcatcacgttctagacgtgagaggaagaacagaaga
ggccagcaagaagcacttgaacgtctgaaaaaagccaaagctggggaaaaattaaaatat
gaggttgaggagttcacgggcatttatgatgaaatagatgaggatgaatactccaagatg
gtcagagaccgtcaggatgatgactggattgttgatgatgacgggacaggttatgtagaa
gatggaagggaaatctttgatgaagatctggatgatgatgctcttggttccaataagaaa
ggaaaaggtggcagaacatctacaattgataaaaagaacgtgaaaaaatctgtggtgtca
aagccaaacacaataaagtcgatgtttatggccagtgctgggaagaaaaacacagataaa
actgtggacctgtccaaggatgatttacttggggatattcttcaagatattagtgctgaa
acagttcagctaagtccaccaccagttataatgctgaaaaggagaaggtctgctggagta
ccactcaatcctttctctgtgaagtcccaaacttcaaaggtaatcacccctgtatcaaag
aaagctcctgctcatgttagaaaggaaactcttcctccagcttcatttcatccaaaacat
cccaattacacagcacaatctgtcaacatctctgaaaatgaggacaccaagcatgtgcaa
aaacctatagaaaaggagggaatagtgaaggcagtaggagagaaagctactaaagcactt
ccagatgatgatcagggaatgatggattttgatgaggaggattttgatgaacctatggaa
gcagagcatgtggaaactatacctgagacagctgaaagcttgaaaagagacaatgaaatc
gagaagaaagagacagagcagctggaatcagagaagaaagagacatctatcctaagttgt
tctctcccaggtctctcgtgttgggacagaattgatgaggatgaagctgatctagtagca
gcagaagttcagctggaccccaatctccttccacttgtgaagggggaaagtgatgatcaa
gtcttaagattttattggctggatgcttatgaagatcagttcagtcagccaggtgtggta
tttttgtttggcaaagtttggattgaatctgcaaccacctatgtcagctgttgtgtgaca
gtgaaaaatattgagagaactgtttatctgctgccacgtgaaacagaaatcgacctatct
actggtaaagagacagagactccagtaactataatgagtgttttcaaggaatttaatgac
agcatttcaccaaagtacaagatcatgaagttcaaatccaagaaagtggaaaaatactac
gcttttgagattccggatgtaccagcaaaatctgaatacctagaaattaaatattcggct
gaatgccctcggcttccccaagatctgaagggacaaacattctcgcatgtctttggaacc
aacacctccagcctggaacttctcttgatgaatcagaagatcaaaggaccctgctggctg
gaaataaaaaatccacaaccttcaaatcagccactcagctggtgtaaagttgaggctgtc
gtcatgaagcctggcttggtgaatgtggttaaagatctttctcctcctcctcctctggtg
gtcatgtccttcagcatgaagactattcagaacccaaagactcaccagaatgaggttgtg
gctcttgcagctctggttcatcagaaatttcctttggataaagctccacctcagcctcct
tttcaaacacacttttgtgctgtttccaaaccgagtgattgcatttttccttatgacttc
aaagaagccgttaaaaagaagaatgctaaaatagaaattgctgcaacagagagaacactg
ctggggtttttccttgcgaagattcacaaaattgacccagacgttgttgtgggtcataat
atttatggatttgatctggaagtgctgcttcaaagaattaatttgtgcaaagttcctcac
tggtccaagataggtcgactgaggagatctaatatgccaaagcttgggggccgaggaggg
tttgctgaaaggaacgctgcctgtggtcgaatgatctgtgatgtagaaatttctgctaaa
gaactcattcgttgcaaaagttaccatttgcctgaactggtccatcagattttgaaaaca
gagaagataacaattctaccagaggagattcgaaatatgtacagtgattctcctcgctta
ctgttcctgctggaaaacacctggacagatgccaagttcattctccagatcatgtgtgag
ctgaatgttctgccactggctcttcagataacaaacatctctgggaatgtcatgtcgagg
acaatgatgggtggacgatctgaacgaaatgagttcctgctgcttcatgcctttcatgag
aaggattatatcgtgccagacaaacaagttttcaaaaagcctccacagaagctggtggat
gaagatgaagattttgaagatcagaataaatcaaagatagggaaaaagaaagcagcatat
gctgggggcttagtcttggatcccaaaatcggtttttatgacaagtttgttttgcttctc
gacttcaacagcttgtacccatcgattatccaggagtacaacatctgctttaccaccgtg
cagcgactgtcatcagaagcacagaaaagggcagaggctgaagaagaggaagaaattcca
gagcttccagacccatctctggaaatgggaattttgcctaaagaaatcaggaaactggtg
gagagaagacgccaagttaagcagttaatgaaacagccagatttaaatcctgacctctat
ttacagtatgatatcagacagaaagctttgaaactcacggctaacagcatgtatggctgc
ctgggattttcctacagcagattctatgccaagcctttggctgctttggtgacacataaa
gggagagagattttgatgcataccaaggagatggtgcagaagatgaaccttgaagtgatt
tatggagacacagattccattatgataaacactaatagcaccaatttggatgaggtcttc
aagttggggaataagatcaaaagtgaagtgaataagctgtacaaattgctggaaattgat
attgatggaatttttaagtccttgctcttgttaaagaagaagaaatacgctgctctgact
gtggaaccaacaggagatgggaaatatgtaactaaacaagaactaaaagggctggatata
gtccggagagactggtgtgatcttgctaaacagactggaaactatgtaattggtcagatt
ctttctgatcagccccgagacataattgtggaaaatattcaaaggcgacttatagaaatt
ggagaaaatgtggccagtggtcagattccaacaaatcagtttgaaataaacaaggcattg
acaaaagatccccaggattatcctgacaaaaaaaccttgccacatgtgcatgttgccatg
tggataaactctcatggaggccgaaaggtgaaggcaggagacacagtgtcatatatcatt
tgtcaggatggatcagatctcagtgccggccagcgagcatatgctccagagcagttaaaa
aagcaagaaaatcttacaattgatactcagtactacctgtcacagcaaatacatccagta
gttgctagaatatgtgagcctatagagggaattgattctgttcttattgcaacctggtta
ggactggatccctcccaattcagagtccatcaccattaccataaagatgagaatgatgcc
ttggttggtggcccagctcagctcactgatgaggagaaatacagggattgtgaaagattc
aagttttgctgcctcaaatgcggaacagaaaatatttatgacaatgtctttgatggttcg
ggccgatttattgaacccagcttgcaaagctgcagcaagacagagtgtgaagagcctcct
ttcagctatgtggttcaaatgagcaacaagttactgctggatatcagacgctacctcaga
aaatactactgtggttggttaatatgtgaggacccaacgtgccagaatcgaacccgtcgt
cttccgctgagtttctcccggagcggccccgtgtgccaggcctgcaggagggctgttctg
aggccagagtattctgataaggccctgtacactcagctctgcttctaccgatacattttt
gacgtggactatgcgatggataaagtggtcactgaggaggagaaagagtatttgaggaag
aagaaacacttcccactcaggagggaagttgctgaggcctacaaaagactgaagagcacc
gtagacaaatgcctgtccatgagtggctactcagaagtgaaccttggcaaactcttcact
ggcagtataggaagatctgtgggagagtccagtaatgaaagacagtga
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integrated database retrieval system
