Sylvia atricapilla (blackcap): 136358152
Help
Entry
136358152 CDS
T10263
Symbol
BCOR
Name
(RefSeq) LOW QUALITY PROTEIN: BCL-6 corepressor
KO
K23215
bcl-6 corepressor
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136358152 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136358152 (BCOR)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
136358152 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
136358152
NCBI-ProteinID:
XP_066170141
LinkDB
All DBs
Position
2:complement(107763025..107802741)
Genome browser
AA seq
1781 aa
AA seq
DB search
MLSATPLYGNVHSWMSNERVRMCGINEDRKIPVNDGDAPKSRLELREENHLNHSVVDATT
AHRIDSLAALSMDRSGLMREGLRVPGSIVYSSLCGLGSEKSRDATGSIASXGFTPERNPE
IQFKSNPPEAVESAAVSGKAPNGFSAIYXTPPGIQKNSVPTGETLGLDRAAGDRQSPLGV
NGASYLRLPWVNPYMEGATPTIYPFLDSPNKYSLNMYKXLLPQQSTYSLPQPGYSPVCTN
GERFXYLPPSHYVAPHIPSSLASPMRLSTASASPAIPPXVHCPDKSLSWKMGVSPGNPVD
THAYPHIQSSKQPRVPTAKPAPANLPADPALLLPHSPRPSPRSRCPRQVGDAYADFHQPF
PQDHNSPSSAVTLPKPYVNIGNEFPPARLPNGKLPKGSDAGEAPLPSAPHATESWPRRKD
SRSPPLLEKQTPTKDVTDKPLDCQRKWLMQKTAGKSDHGKKXMPTVLVHGRAGGGTHCQA
GEVQKETISPGNSCPIYRPEIISTAPSSWIVPGPSPSEEAGKNVQLKNKAXDWVMPQXRS
SSCPRMGGTEAVVGSVSGRXQREGGQRQRHQLPNANVDCAKTARSSAESTASVIQHVGQP
VATPAKHSSKVAKSCGQEANFKADETALASSPIFLPPNEAFRSPPLPYPRSYLPXPVQEG
IAISPLTLHGKGHVYPHPVLLPNGSLYPTHLAPKPGLPYSMPAGRGEFMTYQDALGVGMV
HPMLLQHSALEINKEEKTDRRSRSHERVRYEDPALRGRLPELLEGGGKMHFEMPGDKSVK
LHQSSGHGKKLCKSDKHLFPDLLRDEQEAKREANVTKASFATESSNQTNDATKPQGRAGS
QHRDFMXWREEFGRRNNDVHEPIISSKPRVHQCLAXGKKIYLXANLKREWRSSPSPVFLE
STHESDAPALAFGKVQEDAKPFCMGTAPPSIDANXTYTKDGAEDAESADGKXMKPKPSNW
AKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAMMR
FSELEMKEREGQTATKDSEVCRFSQADWENLKGNSEKKPKSVALEDAIADQNDNDRCNFT
SAENNRGHFLETPEEKDLSNEKCYLERHSVYEKAEDQPTEDFGQHSCPRLDRKRKHSGER
VQNDGSQNESFVDELQDEVISKAKKKKNSKDDWPEREMTNNSSNHLEEPNCNEVTNLKVC
IELTGLHPKKQRHLQHLRELWEQQVSPERSPSGKLGRQSRKDLAEAVQPEATAKVKDFTE
ERHTKKRSEAKSNRSWSEESLKTSDNEQGLPVFPVSPHMKSLSSTNANSKRQAQPSCTPA
SRLAAKQQKIKESRKTDGLYTDEEEDFQHASLLPKYSECEKPSGKRQCKTKHLALQERRR
RSSLTGDDTTDIENAEDKVTVTRKVRKRLEPTSDCDSSPAKAYEQQKPYERLQQTQPSLL
PVPQPLPLGSPAPDTALSRLDTAPSRPTDTAPSRPMPPEARRLIVNKNAGETLLQRAARL
GYEEVVLYCLESKACDVNHRDNAGYCALHEACARGWLSIVRHLLEYGADVNCSAQDGTRP
IHDAVENDHLEIVRLLLSYGADPTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRSVDD
PGLYWDFYGSSVCDPKDESGFDVLANPPGPGDEDEDGFSDVFEFEFLDEPPLPCYNIQVC
LSQGPRNWLLLSDVVKRLKMSSRIFRCNFPNLEVVTITEAEFYKQTSLSQLFSCATDLEA
FNPESKELLDLVEFTSELKTLLGSELHWLHPHEDPPFDILW
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaactcccctgtatggcaatgttcatagctggatgagcaatgaaagggtc
cgcatgtgtggaattaatgaagacaggaaaattcccgttaatgatggtgatgcaccgaaa
agcagactggagttgagggaggaaaatcacctgaatcacagtgtggtggatgcaactaca
gcacatcgcatcgacagtcttgcagctctgagtatggacaggtctgggctcatgcgggaa
ggactcagagtgcctggtagcattgtctattccagcttatgcggacttggctcggaaaaa
tcgcgggatgctacgggttcgatagccagcnctggatttactcctgaaagaaatccagag
atacagtttaagtctaatccccccgaagcggtggaaagcgcagctgtctctggaaaagcc
ccgaacggcttcagtgctatatacnaaacgccacctggaatacaaaaaaactcagtcccg
acaggggagacactgggtttggaccgagctgcgggggacaggcagagtcccctcggtgtc
aatggtgctagttacctaaggctcccctgggtaaacccctacatggagggcgcaacgccc
accatataccctttccttgactcaccaaataagtattcgttgaacatgtacaagngattg
ctacctcagcagtccacctacagcttaccgcagcctggctactcgcccgtatgtacgaac
ggtgaacgttttntatacctgcctccctcccactacgtcgcccctcacatcccttcgtcg
ctggcgtcgcccatgaggctctcgactgcttcggcttccccggcaatcccacctntggtg
cactgtccggataagagcttgtcatggaagatgggggtgagcccaggcaatcctgtcgac
acgcacgcctacccccacatccagagcagcaagcagccccgggtccccaccgccaagccg
gcccctgccaacttgccagcagatcctgcactcctgctgccgcactcgccccggccgtcc
cctcgctcccgctgcccccgccaggtcggggacgcctacgccgatttccaccaaccattt
ccccaggatcacaactctccctcctctgctgttacgctccctaagccctacgtgaacatc
ggcaatgaatttccacctgctcgccttcccaatgggaagcttcccaaaggcagtgatgct
ggggaggcacccctgccgtctgccccccatgccacggaaagctggccacgacggaaggac
agcaggtctcccccactcctggaaaagcagaccccgaccaaagacgtcaccgacaaaccg
ctggattgtcagcgaaagtggttgatgcagaaaactgctggcaagtcggaccacggtaag
aaantcatgccgacggtgctggtgcatggaagggcaggaggggggacgcactgccaggcg
ggtgaagttcagaaagaaaccatttctcccgggaacagctgccccatctacaggcctgaa
attatcagcacggcgccatcctcctggattgttcccggtcccagccccagtgaggaggct
gggaagaacgtccaactgaaaaacaaggcgntggactgggttatgccacagncacggagc
tcctcctgtcccaggatgggtggcacggaggcagtggtcggcagcgtttcgggacggtga
cagcgggagggcggccagcgtcagcgtcaccagctccccaatgccaacgtggattgcgcc
aagaccgcccggagctctgcagagagcaccgcctcggttatccagcacgtcgggcagccc
gtcgccacccctgcgaaacacagcagtaaggtggccaagtcctgtggtcaggaagccaac
ttcaaggcggacgagactgcactggcctccagccccatcttcctgccgcccaacgaggcg
tttcgctccccgcctctgccctaccccaggagctacctcccantaccagtgcaggagggg
atcgccatcagccctctcaccctccacgggaaaggacatgtctaccctcaccctgtcctg
ctgcccaatggcagcctctaccccacccacctggctcctaagcccggcctcccttacagc
atgccagccgggaggggggagttcatgacttaccaggatgcgctgggagtgggcatggtg
caccccatgctgttgcagcactcagcgttggagatcaataaggaggagaagacagaccgg
aggtcacggtctcacgagagggtccgctatgaggacccggctctgcggggccgattgcca
gagctcctggagggtggagggaagatgcatttcgaaatgcccggtgacaagagcgtgaaa
ttgcaccagagctctggccacggtaaaaaactctgcaaaagtgacaaacacctcttccca
gatctgctgcgagatgagcaagaggctaagcgcgaagcaaatgtaacgaaagccagcttt
gctacagaaagcagtaatcagactaatgacgctacaaagccacaaggtagagcagggtct
cagcacagagattttatgtaatggagagaggagtttggaagaagaaataatgatgttcac
gaacctataatttcaagcaagcccagagttcatcagtgtttggcttaaggaaagaagatt
tatctgtgagccaacctaaagagagagtggcggtccagcccttctcctgttttcttggaa
agcacgcacgagagcgatgctccagctctggcttttggcaaggtgcaggaggacgcgaag
ccattctgcatggggaccgcgccgcccagcatcgatgccaacnagacttataccaaagac
ggggccgaggacgcggagtctgctgatggcaaanacatgaaacccaagccatcaaactgg
gccaagaggatcgccaactctgccggttacgtaggtgaccgattcaagtgtgtgaccacg
gaactctacgccgactccagccagctcagccgggagcagcgggccttgcagatggaagga
ttacaagaggacagtattttatgtctacctgctgcttactgtgagcgtgcaatgatgcgc
ttctcagagttggagatgaaagagagagaaggccaaacagctaccaaagactcagaggtc
tgcagattcagccaggcagactgggaaaacttgaaaggaaacagtgaaaagaagccaaag
tcggttgctctggaagatgccattgctgaccaaaatgacaatgacagatgtaactttact
agtgcagaaaacaaccgaggtcactttcttgaaactccagaggaaaaagatctctcaaat
gagaaatgttatttagagagacattctgtatatgaaaaggcagaagaccagccaacagaa
gattttggccaacattcatgtccacgtctggacaggaaacgtaaacactctggtgagaga
gtgcaaaatgatggcagccaaaatgaaagctttgtggatgaactgcaggacgaagttata
tcaaaagcaaaaaagaagaagaactccaaagatgactggcctgagagggaaatgacaaac
aattcctctaaccacttagaagagcccaattgtaatgaggtgaccaacctgaaggtgtgc
attgaattaacagggctccatcccaaaaagcagcgtcacctgcagcatcttagggaacta
tgggagcagcaggtgtcaccagagagatccccgtccggcaagttgggccggcaaagcagg
aaagatttagctgaggctgttcagccagaggccactgcaaaggtcaaagacttcacagaa
gaaaggcacaccaagaaaaggtcagaggccaaaagcaatagaagttggtctgaagagtcc
ctcaaaacaagtgacaatgaacaaggcttgcccgtattcccggtgtctccgcacatgaag
agcctttcatccaccaatgcaaacagcaaaaggcaggctcagccaagctgtactccagcc
tcgaggttggctgccaaacagcagaaaattaaagaaagccggaagacagatgggctgtac
acagacgaagaggaggatttccaacatgcatctctgctgccgaaatacagcgagtgcgag
aagccatcagggaaacgtcagtgtaaaacaaaacacttggcactgcaggagaggagaagg
aggtcatctctgacaggggatgacaccacagatatcgaaaatgctgaagataaggtaacg
gtgacgaggaaagtcaggaagcggctggagccaacttcagactgcgactcctcgccagcc
aaggcgtacgagcagcagaagccgtacgagcgcctgcagcagacgcagccctcgctgctg
ccggtcccgcagcctctgcccctgggcagcccggccccggacactgccctgagccggctg
gacacggccccgagccggcccacggacaccgccccgagccggcccatgccgcccgaggcg
cggcgcctcatcgtcaacaagaacgcgggggagacgctgctgcagcgggcggcacgcctg
ggctatgaggaagtggttctgtattgtttggaaagcaaggcgtgtgatgtgaaccatcgt
gacaacgcgggttactgtgccctgcacgaggcctgtgccaggggctggctgagcatcgtg
cggcatctcctcgagtacggcgccgacgtcaactgcagcgcccaggatggaaccagaccg
atccacgacgcggtggaaaacgaccacttggaaatcgtccgcctgttactgtcctatggt
gctgatccaacacttgcaacctactctgggaggaccattgtgaaaatgacccacagtgag
ctcatggagaccttcctcacagagtatttaactgacctgcaaggtcgaagtgttgatgac
cctggtttgtactgggatttctatggcagctctgtgtgcgatccaaaagatgaatctgga
tttgatgtcttggcaaatcctcctggcccaggtgatgaagatgaagatggctttagcgac
gtgtttgaatttgaatttttggatgagcctcccttaccatgttacaacattcaagtgtgt
ctctctcagggaccacggaactggcttctgctctcggacgtggtgaagaggctaaaaatg
tcatctcgcatcttccgctgcaacttccccaacctggaggtggtcaccatcacggaggca
gagttttacaaacagacttccctcagccagttgttctcttgtgctacggaccttgaggct
tttaacccggagagcaaagagctcttggacttggtggagttcacaagcgagctcaagact
ctgctcggctccgagcttcactggttacatccacacgaggaccctcccttcgacatcctc
tggtga
DBGET
integrated database retrieval system
