KEGG   Sylvia atricapilla (blackcap): 136358194
Entry
136358194         CDS       T10263                                 
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sati00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136358194 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sati03041]
    136358194 (U2AF1)
Spliceosome [BR:sati03041]
 Complex A
  U2 snRNP components
   U2 related factors
    136358194 (U2AF1)
 Complex B
    136358194 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 136358194
NCBI-ProteinID: XP_066170229
LinkDB
Position
2:110470709..110485207
AA seq 235 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGRERDRRRSRDRERSGRF
NT seq 708 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaggtcaactgctcattt
tatttcaaaattggagcttgtcgccatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggaacattatgatgag
ttctttgaggaggtcttcacagaaatggaggagaaatacggcgaggttgaggagatgaac
gtttgtgacaaccttggagatcatctagttggaaatgtatatgtaaagttccgccgtgaa
gaggatgcagagaaggccgtgatcgacctgaacaatcgctggttcaatgggcagcccatc
catgccgagctctcccccgtgactgacttcagagaggcctgctgccgtcagtacgagatg
ggagagtgtacacgaggagggttctgcaacttcatgcatttgaagcccatttctcgggag
ttgaggcgcgagttgtatgggcggcgtcgtaaaaagcatagatccaggtcgaggtcccgc
gagcgccggtctagatccagagaccgtggccgtggcggaggaggaggcggcggccgcgag
cgcgacaggaggcggtcacgggaccgcgaacggtccggtcgattctga

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