Sylvia atricapilla (blackcap): 136358194
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Entry
136358194 CDS
T10263
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136358194 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136358194 (U2AF1)
Spliceosome [BR:
sati03041
]
Complex A
U2 snRNP components
U2 related factors
136358194 (U2AF1)
Complex B
136358194 (U2AF1)
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Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
136358194
NCBI-ProteinID:
XP_066170229
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Position
2:110470709..110485207
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AA seq
235 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGRERDRRRSRDRERSGRF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaggtcaactgctcattt
tatttcaaaattggagcttgtcgccatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggaacattatgatgag
ttctttgaggaggtcttcacagaaatggaggagaaatacggcgaggttgaggagatgaac
gtttgtgacaaccttggagatcatctagttggaaatgtatatgtaaagttccgccgtgaa
gaggatgcagagaaggccgtgatcgacctgaacaatcgctggttcaatgggcagcccatc
catgccgagctctcccccgtgactgacttcagagaggcctgctgccgtcagtacgagatg
ggagagtgtacacgaggagggttctgcaacttcatgcatttgaagcccatttctcgggag
ttgaggcgcgagttgtatgggcggcgtcgtaaaaagcatagatccaggtcgaggtcccgc
gagcgccggtctagatccagagaccgtggccgtggcggaggaggaggcggcggccgcgag
cgcgacaggaggcggtcacgggaccgcgaacggtccggtcgattctga
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