Sylvia atricapilla (blackcap): 136358272 Help Entry 136358272         CDS       T10263                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism sati  Sylvia atricapilla (blackcap) Brite KEGG Orthology (KO) [BR:sati00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sati04515]     136358272 (DCHS1) Cell adhesion molecules [BR:sati04515]  Cadherins   Cadherin related    136358272 (DCHS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th RET_CLD1 Cadherin_4 PepSY Sharpin_PH CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  136358272 NCBI-ProteinID:  XP_066170347 LinkDB All DBs Position 2:complement(115183800..115227233) Genome browser AA seq 3266 aa AA seqDB search MEQMKRSTMLLLELLILGGLRAGMSSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDHYSFIAVTPEGITVEVNIQVNDI NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYMIKGGNVGQAFRLETR RGPNGVLYLDLVVSNVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVIKL NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA RDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT PALSSSAVVHVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGAFGSLSY SIGSGIGSIVPTQFSIDKHSGQLCTVQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL EDTNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSL NKDTGVISLSWSLSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQY FFSVPEDMPQGASVGAVRAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE SQSVLILDVQARSGSPPAYSNTRVKISVSDVNDNVPAFPAPSDSILLPEATEPGTTVYTV QAEDRDSGANGQVTFELVSGGEGTFVVERASGAVRLLGALQHEAISAYSLAITARDGGIP QLSSTFTLLVHVQAEDDNGPIFDTLNYRVEVQEGVPVSTRFLQVRALARDVESTALTYHL RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGPGTAADTRKTGTSTVRVS ITDENDNSPRLSEERYFFTVSENQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH TQTGEVSTKHSLDREQQSSFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG QELTVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLHVATGELRTATVL RRADRAEYVFTVTASDRGAVPRSTSAIVRVQVLPSSRVLPRPDATVLTLQPLEGVKPGSV IGSVAPLDAPARGQLTYTVVGGGGDGTFVVDSMTGEIYAARELDYEAGARHVLQVSAEDT QHGYPSSRLVLVQIHVQDCNDQAPTFPEDPITIVVPENAQVGSSIFTFQALDGDGAGPNS QVRYALLHLEPPGAPFQLDSRSGQLTLRQHLDREAAASFLLVVEATDQARNVSQRRSAAV TARVFVTDENDNVPVFLSPATVSVMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNGD GRFHLNPSTGALSIVRALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPAF EKPEYEAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRPL DREEQEQHVLTVYARDAGLPPSLTKATVWIIVGDENDHAPHLESESYSVEVPENQSRVAL YTLRATDPDAGENGRLEYRVAGGDPGQDFSLDPVSGVLSTAHALDREQIASYSLIVVVQD HGSPPRSATMSVTVQVLDLNDNAPSFAQASYVVEVPEDLPVGALVLQLVAEDPDEGTNGQ VSYYLGNESLGMFQVEPESGRIRSAQALDRERQPTYSFLAKAVDSAPWEPKSAAVRVTVV VRDVNDHAPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFASPSSAFAIN SYTGDIQLLQSLGSLSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTSD VALAENAAPGTEVASVQAVHTGGSSGHITYSIISGNERNTFLIQPSSGAISVQDSSSLDF EASPRLRLVIQAETAASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVL ADDLDQGANGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLL LEGDAADTFGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV PTFTQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFT TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPRFQEPCYNASVPEDL RPGTTVLTLEAGDADLSRENAGFDYTIVSGNSGNAFQVESRVFRSGGQLHTQGALVLVES LDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFTRAEYRAAVSEAALPGT ELLRVAAHDADSGPRGRVHYTISSGDQHGLFQLHESTGALSLVRPLDREAQALHTLVVRA TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADTGAFG ELRYMVLEQAVGDPTMGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVRATDAGNASA TVTVRVLVTGEDEYDPIFLSPSFNFEVPEGARKGQTIGRVLATDEDEGADGVVLYTLAKP SPYFAINQTTGSIYLRVDSQPQAGAGRAKREPREMSLEVQARSPLPASRVASAQVTIDVT HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRRGHKKAEGEGALARVQSG SLQKLGCEEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR MINEYPRVASITSSMQEHIAARGPDSGIQQDADQLSDISCEPAALESTQWFKSKKGSGLL LPGPPLQLYREDGGGSAFLGVRCGLSVSSQPQDYTFPEDGKPSVEGSLTAIVASDEELRG SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH PGAKSVPPKPPPGRTFPHPSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG ISQGPSTSTISAEHSLEPPEEAELRI NT seq 9801 nt NT seq  +upstreamnt  +downstreamnt atggagcaaatgaagaggtcaacaatgcttctgctggagctgcttattcttgggggcctg agagcagggatgagctctgctgtcctgggcaccctggatctacaaatagatgaggagcag ccggctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac atgtatttcatctcagcacaggagggcagtggcgtctccactgacttggggatagatgag aatactgggatcatcaaaacagctcgtgtcctggaccgggagactcgagaccactacagc ttcattgctgtcaccccagagggcatcacggtagaagtgaacatccaagtgaatgacatc aatgaccatgccccagcatttcccaaacagcacagcacctttcagatcccagagcacaca cccattggcagcaggtttcccttggacccagcctttgatgctgacagtggccttctgaac acacaaggctatatgattaagggagggaatgtggggcaggccttccgcctggaaacgcgt cgaggacccaatggggtcctgtatttggacctggtggtcagcaacgttctggatcgggag aaccgttcatcgtactcactgctgttggaagcctacgatggtggttctcctccccggagc actcagatgacactggatgtgtccattcaggacatcaacgacaatgcccccagctttaac cagagccgctatcatacactcatttcagagaacctcaaacctggcagcagcatcctgcag gtctttgcctctgacgcagacgaaggtgacaatggggatgtgatttatgagatcaatcga cggcagagcgatcctgaccagtacttcaccattgacgcccggactggggtcatcaagctc aacaagggtctggactacgaagtgaggaaggtgcatgagctggtggtgcaggcaagggat aaggctgtccatcctgaggtcaccacagcctttgtcactatccacgtgcgtgactacaat gacaaccagcccaccatgactatcatctttctgagtgaggatggctccccacagatctcc gagggagcgcagcctggacagtatgtggcacgcatttctgtttccgatccagactatgga gagtactccaatgtcaatgtcacattggagggaggagatggcaagtttgccctcactacc aaggacaacatcatctatctgatctgcgtggaccaacttctggatcgggaggaaagagac tcctatgatctgcgggtgacagctactgactcaggaacaccccctctccgggcagaatca gcctttgtgctgcaggtgatggatgttaatgacaatcccccgctctttgaccagcaggag tacaagcagagcatccctgaggtggtgtacccaggcagctttgtcctgcaggtgacagct cgtgacaaggaccagggtcccaatggggaggtgaggtacagcattctgcatggccgtgac acccactccagctggtttaccattgaccctgccactggcatcatcaccactgctgcccca ctggattatgagaaggaccctcagcctcagctcactgtgctggccacagaccggggaacc cctgccctctcttcctcagctgtggtgcacgtggcgttgcaggatgtcaatgacaatgag ccagtgttcaggagtaacttctacaatgtgtccctgaaggagaacacccctgttgggacc tgcttcttgcaggtgacagccacagatgcagacagtggtgcatttggctccctttcctac tccattggctctggcatcggcagtattgtccccacacagttcagcattgacaagcactca gggcagctgtgcacagtgcagcccctggaccgtgatgagggcacgtctgcctacgacttc accatcactgctgtggatgggggcggcctgaactccatggtgtatgtgaaagtgttcctg gaggacacgaatgacaaccggccagtgttttatccactggaatatgctgccagcatcagc actcagagcatgccggggacagctgtgctgcgtgtcactgcccatgacaaggatgagggg ctgaatgggagagtgacgtaccgcatcgtcctgggaaactcacccccgctcttctccctc aacaaggacacaggtgtcatctctctgtcatggtctctgagtggcaaagccaacaccctg gtgcagctggtgatctctgctcaggatggagggggcctgcaggcacagccaaatgcccgg gtaaacatcagcattgtggagggcacagtctcaccccctgtctttgagcaagctcagtac ttcttcagcgtgcctgaggacatgccacagggcgccagtgtgggggctgtccgggcccag aacccaccaggtcacgctgatgacatcttctattccatctcctcgggggaccctcatggc tatttctccattgactcggcttcggggcagctccgcaccagcctgcctctggatcacgag tcccagtcggttctcatcctggatgtccaggcccggagcggttcaccccctgcctacagc aacacacgagtgaagatctccgtgtcagatgtgaacgataacgtgccggcattcccagct ccctctgactccatcttgctgccagaggccacagaacctgggacgacagtctacaccgtg caggctgaggaccgtgacagtggtgctaatggacaggtgacctttgagctggtgtcaggg ggcgagggcacctttgttgtggagcgtgcctcaggggcagtgcggctccttggggccctg cagcacgaggccatctcggcctacagcctggccatcacggcccgggacggtggcattccg cagctcagctccaccttcacgctgctggtgcacgtacaggccgaggacgacaacgggccc atctttgacactctcaactaccgtgtggaggtgcaggagggtgttcccgtctccacccgc ttccttcaggtgagggccctggcacgtgatgtggaatccacggcccttacctaccacctg cgtgcagatggggacgccgccagctttggcatcgtgcctgaaagcggctggctgtatgtc aagagtgccctggaccgggagacgcgggacttgtatgtgctgacggtgctggcctcggtg ggaggccccgggactgcggcagacacacggaaaactggcaccagcaccgtgcgggtcagc atcactgatgagaatgacaacagccctcggctgagcgaggagcggtacttcttcaccgtg tctgagaaccaggctcctggcagcagtgtgggaagggtgatggcgagcgaccgggacgcc gggcagaacagccggctcacctaccgcctgctccagcacgatcccaacttcctcatccac acacagacaggagaggtcagcaccaagcatagcttggatcgggagcagcagtccagcttc cagctcctggtgattgtgcaggatgggggagcaccgccccgcagtgccaccggaaccatc tatgtcactgtgctggatgagaacgacaacgctcctgctttcctccacgtgggcagtggt caggagctaactgtgcaggtgctggaagagaagccatcgggactcctggtcgcttcgctg caggccaaggaccctgacgagggggagaatgggaccatcatctactcactgataggagcc tgggcagagcgtttcactctgcatgtggctaccggggagctgcggacagccacggtcctg cgccgcgctgaccgcgccgagtacgtcttcaccgtgacagccagcgaccggggcgcggtg ccgcgcagcacctcggccatcgtccgtgtgcaggtgttgccatcctcccgtgtgctgcca cggcctgatgccaccgtgttgaccctgcagcctctcgagggggtcaagccggggtctgtg attggttcagtggctcccctggacgcccctgcacgaggacaactgacctacacggtggta ggaggtggtggggatggcacctttgtggtcgatagtatgacaggggagatttatgctgcc cgtgagctggactatgaagctggggcacggcacgtgctccaggtgagtgctgaggacacg cagcacggctatccctccagcaggttggtgctggtccagatccacgtgcaggactgcaat gaccaggcacccaccttccccgaagaccccattaccattgtggtgcctgagaatgcccag gttggctcctccatcttcaccttccaggcgctggatggggatggagcgggccccaacagc caggtgcgctatgctctgctgcacctggagccccccggagcccccttccagctggacagc cgctcggggcagctgaccctgcgccagcacctcgaccgggaggctgctgcctccttcctg ctggtggtggaggccacagaccaggcccgcaatgtcagccagcgccgctcggccgccgtc acagcccgcgtgtttgtgaccgacgagaacgacaacgtgcccgtcttcctgtccccggcc accgtcagcgtcatggaggaccagcccacgggctttgtggccctgcacgtggtggcccag gacagcgacctgggagagaacggacgtgtgagctactccttgcgagcaggcaacggtgat ggccgcttccacctcaaccccagcactggtgcactctccatcgtgcgggccctgaaccgg gaggaggtggcacagcacaacctgacggtggtggccacggaccacggcttcccacgcctc tccgccacacagctgctgtccgtgctggtgctggatgtcaacgatgaggctcctgccttc gagaaacccgagtatgaagcccacatcatggagaacctgccagccggcagtccagtgctg caggtgctggccacggaccgggatctgggtgccaacgggcaggtgtcttatgggggtctc tctggggggccgttctccatccacccacagacgggactcattgtcaccacacgtcccctg gaccgggaggagcaggagcagcatgtgctgacagtctacgcgagggacgccggcctgccg cccagcctcaccaaggccacggtgtggatcatagtgggggatgagaatgaccatgcaccc cacctggagagcgagtcctactccgtggaagttcctgagaaccagagtcgtgtggcactc tacactctgcgggccactgatcctgatgctggggagaacggacgcttggaataccgggtg gcaggtggagaccctgggcaggatttcagcctagaccccgtctctggtgtcctctccact gcacatgcccttgaccgagagcaaattgcttcctacagcctcattgtagtggtgcaggac cacggctcccccccacgcagtgccaccatgtcggtgactgtgcaggtgttggacctcaat gacaatgcacccagttttgctcaggccagctacgtggtggaggtgccagaggacttgcca gtcggcgccctggtgctgcagctggtggctgaagacccagatgagggcaccaacggacag gtctcctactacctgggcaacgagtcgctgggcatgttccaggtggagccagagagcggg cgcatccggagcgcccaggcactggaccgggagcgccagcccacctacagcttcctggcc aaggcagtggactcggcgccgtgggagcccaagagcgcggccgtgcgagtcactgttgtg gtgcgagacgtcaacgaccacgctccggccttcctgcacagcccgctcaccgtcaacctg tcccgccacactccgctcaagcaggtggtggccaccatgagggccgaggacagggacgcg ggtgccaacgcctccatcctgtaccgctttgccagccccagctccgccttcgcaatcaac tcctacacgggggacatccagctgctgcagtcccttggctcgctcagccagcgccagcgg acgctcttcgtgctggccatggacctggggcagccggcgctctcctccacaggggtagtg gtgatccacgtgcaggaggagccctaccgaggcctgcgctttccccgcagcaccagtgac gtggccctggccgaaaatgccgccccaggcactgaggtggcaagtgtccaggccgtgcac acggggggctcctcggggcacatcacctacagcatcatcagtggcaacgagaggaacacc ttcctgatccagcccagctcaggtgccatctcagtgcaggactccagcagcttggacttt gaggccagcccccggctgcgcctggtgatccaggcagagactgcagcttcctttggcttt atggccataaacctcaacctccaggatgtgaacgacaacctaccccgcttccagctgcag aactatgtggcgttcatctgggagtcacagagctatgactcacctgtcatccaggtacta gcagatgacctggaccagggagcaaacgggcaggtgacttatgccatcaaccagtccctg ccaatgccgggcttgtaccacatcgaccctcagactggcaccattaccactgctgccatc ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggaccgaggaaca ccaccgctcatgggctcggccacgctgaccgtggtggtgatggacatcaatgacaatagc cctaccatcccggtcccctgggagatccgtgtccctgagaacacactgctggggacccag atagcccagctgactgggaacgacgtggactcgggccctgcactctcctacacgctgctg ctggagggggatgcagcagacacctttggggtgctgcgctatggtggccacattgcgctg acggggccactggaccacgagcagcgcagccgctacaccctcaccctgcgcgcctctgac acacgccacgagactgaggccaacctcaccgtccttgtggaggatgtgaacgacaacgtg cccaccttcacacaggttttctatcaggtgctgctgccagagcacacacctgctggcagt gtcatcctcactgtgagcgcaactgaccccgactcagggagcaatggggacatcaccttc cacctggctgtgcccagccctgatgttgccatcgaccccagcaatgggaccctcttcacc acccggcaggtggagttcaatgccagccagcccaccctggacctggtggtggaggcccgt gaccacggctctcccagcctctcatcttgggccacagtgcagctccaggttctggatgtt aatgaccacagcccccgcttccaggagccatgctacaacgccagcgttcccgaggacctg cgcccaggcaccactgtgctaacgctggaggcgggtgatgccgacctctcccgggagaat gctggctttgactacaccatcgtcagtgggaacagcggcaacgccttccaggtggagagc cgggttttccggtccgggggacagctccacacgcagggagccctggtgcttgtggagtcc ctggactttgaggccataccagtatacaacttgacggtggcagcctcagaccggggcctg ccacagcgcagcgccaccgtgcccgtgctcatcaccgtgcaggacgtcaatgacaaccct cccgtgttcacccgggccgagtaccgtgcagccgtgagcgaggccgcgctgccgggcacg gagctgctgcgtgtggcagcccacgatgccgactcagggccacgtggccgtgttcactac accatcagctcaggcgaccagcatgggctgttccagcttcatgagagcacaggggccctg agcctggtgcggccactggatcgagaggcccaggctctgcacacactggtggtgcgggcc acggacacaccaggcgggcactttgcgctggtccccgtagccattgaggtgaaggacatc aacgacaacaagccgtacttccccgtggaggtgctgagcgccagcatccgggagaacttg ccccccggcacgctggtcaccacgctgcgtgctgtcgatgccgacacgggcgcctttggg gagctgcgctacatggtgctggagcaggcagtgggcgaccccaccatgggggatggccga gacgctttcgctgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat gagcgagccaaagccttccagctcctggttcgggccaccgatgctggcaatgcctcggcc actgtgactgtgcgggtgctggtgacaggggaagatgagtacgatcccatcttcctgagc ccctccttcaactttgaagtgcctgagggtgcgcgcaaagggcagaccattgggcgggtg ctggccacggatgaggatgagggggctgatggtgttgtgctgtacaccctggcaaagccc tcaccatactttgccatcaatcagaccacaggctccatctacctgcgtgtggacagccag ccccaagccggggctgggcgtgccaagagggagccacgggagatgagcctggaggtgcaa gcacgcagccccctgcctgcttctcgtgtggcctctgcgcaggtcaccattgatgtcacg cacacctcctttggcctggcacccgacctcaacctactgctggtggctgtggctgcctcg ctgggtgtcgtggtggtgctggccgccgtggccatcgtgctggcactggtgcgctcccgg cagcgccggggccacaagaaggcggagggggagggagcactggcccgtgtacagagcggg tccttgcagaagctgggctgtgaggagccagcactgcccggggctgagcacatctaccac caggcactgccagggtacgggacggagccggcggggccctacacgcggggcggctcactg gatccctcgcattccagcggccggggctctgctgaagctgctgaggacgacgagatacgg atgatcaatgagtacccacgcgtggccagcatcacatcctccatgcaggagcacatcgct gcccgcggccctgactctggcatccagcaggatgccgaccagctctctgacatctcttgt gagccagctgcgttggagagcacccagtggttcaagagcaagaagggctctggcctgctg ctgccggggccacccctgcagctgtaccgtgaggatggggggggcagcgccttcctgggt gtccgctgcggcctcagcgtctcctcacagccccaggactacaccttcccagaggacggc aagccttccgtggagggctcgctcactgccattgtggccagcgatgaggagctccgcggc agctacaactgggattacctgctgaactggtgtccccagttccagccgctggccagtgtc ttcacggagatcgcccgcctcaaggatgagagttctctgcgcaagcccttcccagccaag cccaaggcagagcccaagccccgcatcgaccccccgcccctcatcacctcggtggcccat ccaggtgccaagtctgtgccccccaagccaccaccaggcaggaccttcccgcacccatcc tccctgcgccgctcgcccatcagccacgagggttccatttcgtcctccgccatgtcaccc agcttctccccatcgctgtccccgctggccgcccgctcccctgtggtctcgcccttcggc atctcccaggggccatccacctccaccatcagcgccgagcactcgctggagccccccgag gaggccgagctcaggatttag

DBGET integrated database retrieval system