Sylvia atricapilla (blackcap): 136358572
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Entry
136358572 CDS
T10263
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04340
Hedgehog signaling pathway
Brite
Peptidases and inhibitors [BR:
sati01002
]
Cysteine peptidases
Family C46: hedgehog family
136358572 (SHH)
Glycosaminoglycan binding proteins [BR:
sati00536
]
Heparan sulfate / Heparin
Morphogens
136358572 (SHH)
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Other DBs
NCBI-GeneID:
136358572
NCBI-ProteinID:
XP_066170549
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Position
1:complement(8159577..8169403)
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AA seq
425 aa
AA seq
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MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEKGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYAIETRQPRARLLLTAAHLLFVAPQQNQSEAGPAGGRALFASRVR
PGQRVFVLGEGGRQLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVVEEHSW
AHWAFAPFRLLQAVLAALGPSADGAPMAEPPAPGIHWYSRLLYRIGSWVLDSDSLHPLGM
MVTSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggccatctcggtgatgaaccagtgg
cccggggtaaagctgcgggtaaccgagggctgggacgaggacggccaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactccgtggccgccaaatctgggggt
tgcttccctggctcggccacggtgcacctggagaaaggcgggaccaagctggtgaaggac
ctgaggccaggagacagggtgctggtggccgacaccgaaggccgtctgctctacagcgac
ttcctcaccttcctggaccgcgaggacggctcccacaagctcttctacgccatcgagact
cggcagccccgggcccggctgctgctgacggccgcccacctgctcttcgtggccccccag
cagaaccagtccgaggcgggccccgccggcggccgggcgctgttcgccagccgcgtgcgg
ccgggccagcgggtgttcgtgctgggcgagggcgggcggcagctgctgccggcggccgtg
caccgcgtgtcgctgagggaggaggcgtcgggcgcctacgccccgctcaccgcccagggc
accatcctcatcgaccgcgtgctggcctcgtgctacgccgtcgtcgaggagcacagctgg
gcgcactgggccttcgctcccttccgcctgctgcaggccgtgctggccgccctggggccc
tccgcggacggggccccgatggcagagcccccggcccccggcatccactggtactctcgg
ctcctctaccgcatcggcagctgggtgctggatagtgactctctgcacccgctgggcatg
atggtgacgtccagctga
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