Sylvia atricapilla (blackcap): 136358617
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Entry
136358617 CDS
T10263
Symbol
GTF3C2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136358617 (GTF3C2)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
136358617 (GTF3C2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR5
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
DSE1_N
WD40_Prp19
ASA1
WDR55
SHKBP1_KCTD3_C
Motif
Other DBs
NCBI-GeneID:
136358617
NCBI-ProteinID:
XP_066170603
LinkDB
All DBs
Position
3:246017..255498
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AA seq
866 aa
AA seq
DB search
MASGAARGPSCRERSLRERPGRRSGSAGRSRSRSGEREGEQRLLREELRAGDLDCEDGGE
AAKSPDKPARPQVGPGRAAEGRGEGSANGAVPPPRAAGKRGRKGKAEVLLLELSRAPEPI
PMEKGLGSSEDGDGLETPRGGRPKRRAAKVALLYLQELAEELMPACQPPAPAQGAPEPGQ
RKRRGRRRKEEDTDSDDPAQDADFVPSQEVLQAEEEEEGSDTLLSEASEPELETPRGHGG
RTAATGRSKPQCRGLAPNGFHNSIMAPVEKSSSLTCSLREQKHSQWEFPDWIPVAHRWTC
LSDSEAAPYLPAEEQSPLFSIQREGIKDDGALFRLNRFSSLQPHPERLDVSFFVGGPVWA
MEWCPTPEASAAPQYVAVSCHRSMEETHSVSGLHSGPALLQLWGLGVLQTGQGSPSKARL
AYAIAADHGCVWDMKFCPSGAWEPPTAARTHPQMSRLGLLAAAFSDGRVVVYALPHPGAL
HHAKTTQVKDGSLHKHLICKVQCIATLQVGSIQAGTAAECGQCFSLSWMPSKPHHHLAAG
FYDGTVAVWNLLTKSLLQCVHQPDASLKLYPFRCFLAHDHAVRSVEWCKADSNFLVTVGS
DRKIKFWDLRRLYEPVNSIKRFLSTEVAWLLPYNGITVAQDNCYASYGPCGIHYIDAGYL
GFKAYFVAPRKGTVWSISGSDWLNTVAAGDITGELVAAVLPDLAVNPLNVKRSLDRRFPV
YKADLLPCSPEGPECTEQALPRTHRYSEMVARSYIRFQDTDLRSFQNFPSREPMRRMHRQ
ELKAELSLDRLQLEALHRVRFSPNLDSQGWLVSGGQAGIVRAHCLAGLASGVGHQLLPEC
RARFSVLYGDTASSPGPPEPSPVPAE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcgccgcccgcgggccgtcgtgccgggagcggagtctccgggagcggccg
ggacgacgatcgggttctgccgggcggagccggagccgtagtggggagcgggagggtgaa
cagagactcctccgggaagagctgcgggcgggagatctggactgtgaggatggaggagaa
gctgccaaatccccggacaaacccgcgcggccccaagtcggtcccggccgggcggcggag
gggcgcggcgagggctccgccaatggggcagtgccgccgccgcgggctgccgggaagcgc
ggcaggaagggcaaggccgaggtgctgctgttggagctgtcccgggccccggagcccatc
ccgatggagaaggggctggggagcagcgaggacggagacggccttgagacccctcggggc
gggcggcccaagaggagggcggccaaagtggctctgctgtacctgcaggagctggcggag
gagctgatgcccgcgtgccagccccctgctccagcccagggggctcctgagcccggccag
aggaagcgccggggccggcggaggaaggaggaggacacagacagcgacgaccctgcacag
gatgctgacttcgtgccctcgcaggaggtgctgcaggcagaggaggaggaggagggcagc
gacacgctgctcagtgaggcgtcggagccagagctggagacacctcgagggcatggcggg
aggacggcggccacagggagatccaagccccagtgccgaggcctcgcccccaacggcttc
cacaactccatcatggccccagtggagaagagctccagccttacctgcagcctgcgggag
cagaagcactcacagtgggagttccccgactggatcccagtggcacacaggtggacgtgt
ctctctgacagcgaggctgccccgtacctgccggcagaggagcagtctcccctcttctcc
atccagcgtgagggcatcaaggacgatggtgctttgttcaggttaaacaggtttagttct
ctgcagccccacccagagcgcctggatgtctccttcttcgtgggcggcccagtgtgggcc
atggagtggtgcccgaccccggaggcgtcggcagccccgcagtacgtggccgtgtcctgc
cacaggagcatggaggagactcacagtgtgtctgggctccactcgggccctgctctcctg
cagctctggggcctgggcgtgctgcagacagggcagggctctcccagcaaagccaggctg
gcctatgccatcgctgctgatcatggctgtgtgtgggacatgaagttctgccccagtggt
gcctgggagccacccactgcagcccggacgcacccacagatgagccggctgggcctgctg
gctgctgccttctcggatggcagggtggtggtgtatgccttgccacaccccggggccctg
caccatgccaagacaacccaggtaaaagatgggtccctccacaagcaccttatctgcaag
gtgcagtgcatcgccacacttcaggtgggctccatccaggcaggtactgcagctgagtgt
ggacagtgcttcagtctctcctggatgccttccaagccccaccatcacctggcagcaggg
ttttatgatggcaccgtggcggtgtggaacctgctcaccaaatccctgctgcagtgcgtg
caccagcctgacgcctccctcaagctctaccctttccggtgcttcctagcccatgaccac
gcagtccggagcgttgagtggtgcaaggccgacagcaacttcctggtcacagtgggcagc
gatcgcaagatcaagttctgggacctgcggcggctctacgagcccgtcaacagcatcaag
cggttcctgagcaccgaggtggcctggctgctgccctacaacggcatcactgtggcccag
gacaactgctacgcctcgtacgggccctgtgggatccactacatcgacgccgggtatctg
ggcttcaaggcctattttgtggcccctcgcaagggcaccgtgtggagcatctctggctcg
gactggctgaacacagtggctgcgggtgacatcaccggtgagctggtggcagcggtgctg
cctgacctggctgtcaaccccctcaacgtcaagcgctccttggatcgcagatttccggtg
tacaaagctgacctgctgccctgcagccctgaggggcctgagtgcaccgagcaagccctg
cccaggacccatcgctacagtgagatggtggccaggagctacatccgattccaggacacg
gacctgcgcagcttccagaacttcccgagccgggagcccatgcgccggatgcacaggcag
gagctgaaggcagagctgagcctggaccgcctgcagctggaggccctgcacagggtgcgc
ttcagccccaacctggactcgcaggggtggctggtgtcgggcgggcaggcgggcattgtg
cgggcacactgcctggcagggctggcctctggtgtgggccaccagctgctcccagagtgc
cgggcccgcttcagcgtcctctatggggacacagccagcagccctggcccccctgagccc
tcccctgtgccggcggagtag
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