Sylvia atricapilla (blackcap): 136358685
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Entry
136358685 CDS
T10263
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00100
Steroid biosynthesis
sati01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
136358685 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sati01006
]
136358685 (FDFT1)
Enzymes [BR:
sati01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
136358685 (FDFT1)
Prenyltransferases [BR:
sati01006
]
Terpene biosynthesis
Squalene/phytoene synthase
136358685 (FDFT1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
136358685
NCBI-ProteinID:
XP_066170723
UniProt:
A0A7K7E0C6
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All DBs
Position
3:3166649..3178616
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AA seq
418 aa
AA seq
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MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSHLYHPDWKYTESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTDLANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDLAKPENIDVAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKT
QQVISSIRAMSLPGSPMASRHHYSPIYLSCAMLLAALSWQYLSTLSKATEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctacggaaatggctgggccaccccgaggacatctacaacctgctgcgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgtggc
ctccgcacctgctatcggtacctcaaccagaccagccgcagcttcgccgccgtcatccag
gctctggacggagagctgcgacatgcagtgtgtatattctacctggttctccgtgccctg
gacactgtagaggatgacatgagcatccccttggatgtcaaggtcccgatgctgcacgag
ttccactcccatctctaccatccagactggaagtacacagagagcaaggagaaggacagg
caggtgctggaagacttccccacgatctccatggagttcagaaacctgtccaaggtctac
caggatgtgatttcagatatttgccacaagatgggtgttgggatggcagagttcctggag
aaaaaggtggattctcagcatgagtgggataagtattgtcactacgttgctgggctggtg
gggattggcctttcccgtctcttctctgcatcagagctggaagattccatcgtggggcag
gacacagatctggcaaactccatgggcctcttcctacagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggcccagagaggtttggagcagatat
gccaagaagctctcggaccttgccaagccagagaacatcgacgtggccgtgcagtgcctc
aatgagctcatcaccaatgccctccaccacgtccccgacgtcctcacctacctgtcccgc
ctcaagaaccaaagtgtcttcaacttctgcgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaggtgttcaggggggtggtgaagatccgcaagggc
caggccgtcaccctcatgatggatgccacgaacatacaagctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatcccgagcacggacccctcgtccaacaagacg
cagcaggtgatctcctccatccgtgccatgagcctgcccggcagccccatggcctcccgc
caccactactcccccatctacctgtcctgtgccatgctgctggcagccctgagctggcag
tacctcagcaccctctccaaggccaccgaggagtacgtgcaggcaggagagaactga
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