Sylvia atricapilla (blackcap): 136358717
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Entry
136358717 CDS
T10263
Symbol
TDRD6
Name
(RefSeq) tudor domain-containing protein 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
sati Sylvia atricapilla (blackcap)
Brite
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Gene silencing
piRNA pathway
136358717 (TDRD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
DUF4537
SGF29_Tudor
Tudor_krimper_1st
Motif
Other DBs
NCBI-GeneID:
136358717
NCBI-ProteinID:
XP_066170772
LinkDB
All DBs
Position
3:5675486..5685863
Genome browser
AA seq
2311 aa
AA seq
DB search
MSSGPGSLGRGDTITLRVRAVGLCPEVPILRLWGLLGERKADYALLYREIQAAAGPHLEA
RPEPSGPGASGPRLCPGELALVEVLGVWYRCCVVSCSAQGYRVFLLDEGYVVTTSDCYLA
RGCSELFQLPPEVLGCVVADVMPSHSHEGTASGDSPVPKWTTEAMEFLSFLHGKEVSGVV
QEVITPQLIVLELPQLVAQMRQLGLARRVSYSCFCQMFRRCLPFAQLKKQLCQEPPACSL
GAFAVPQLVRALLSYRPLSPALDYYYPQLQLGVTEPVLVTHVSDPHHVYCQLQCLSQEIC
CLSDTMCHAYDWWEQDLLPKVGSPCAARGMDGQWYRAILLELIAGEQDQHAAVVIFVDYG
KKETVTRADLRHLPAQCFRMPVVTYACALQGVSDGGCGWSPLQVDLLKALVLGRGVTAHI
KAFNSFEHLYYVTLYGENGVDLNHLFGSQACCLVSSHVSQTEAHEQLEVEESLVEELELP
LEAPPVLTHGDLAAVAGVHLKTWTLYNAQVSHLRDPSEFWLQLHEYYQLFRQLRQCMWNF
YSHSTKLDEAGWDPQPGSLCCASGNEGVFYRAVVNRVLDTRVEIHLVDRGSTETVDLCAV
RELLPRFRELPALALKCCLAGVSPPRGSWSEASVSAFREMVLNKELKVWFLNVQGDKYVV
EIFDQSQLGEERVSKLMAQGGYAKYQRYEVPKTYQKSDKSVTQVSPLVHAAEESQINAEK
RFREECDLKSSDRILDSHMGVMVRESPVAAIHNSKSSESLLSRDYEGKENLHTSLRQNYV
EIKPGSSCGGHLEVGSTVNVILSYVENPSCFWCQLSRNCNDLEELMNEIQEHCKNSSQPH
VWPNLVCLAQYSEDKKWYRALIVSEGVCADKVEVIYVDYGNREQVCLTKLRAINERFLRL
EAQAFRCSLYNLIQPNGQNPFAWDEEAIQAFRQFVVDSSSDLDLKCTIFALASINRDLFN
IVDLITPFQSACQFLTERGVARRLFPQKHLESLVQLHSFYYSSHGIKIGSEEDVYITHVE
NPWTFYCQLERCADTLAQLADNISCLSEKMTSTGTLGKSGTLCLARYSDSQWYRGVIIER
QPKTKVFFVDFGNTETIETDDLLILPNDASDILLVPMQAVKCAVSDVASVSKKAAMWFKE
AVLERRLKAIVVAKDSDNTLLVELFDRNTQINTKLKELSLNSTGLCSHVHNETSCSSNTD
VNEKDETSNAGRPLERKKCQPEAQQEQGSKRPFKEVVNIFQHSGKGDEAAGLLEPDEMLS
SKDDAFILNKAGEESLLFSQMDTLSDTKSPAEGRCLMLKNASDLPPQKIVPALKTLVYVS
YVSDPQDFYVQLGSDEVQLNNILESLNNGKSVKDPCGQLFQAGDLISAVYSEDSLWYRAV
VKEKTSNNSIRVHYIDYGDTSVISVDQARRLPKNLSSIPAMSIHCFLGGLKCKKNADWTE
KAVFYFTKRTSEILLSCEFVKKVEDKWEVILSDHQGIITVDLADKDIPSRERLFSRKKID
KRENRGMITGCEPVPPQVQNEISCVSDCKSFSWKFPEAGQTLKIYVTVVNSPGYFWCHRA
DTKDVSYIEKKIEEAEKLGLSSLNDGKSCMKSGDTCLAKYSQDGWFYRAQISSVNDDSVV
VRHVDYGSEESVSLEMIRQMPYELLRVPGQAFACCLSGFNPSDGSWLSEASKKFYDLTEN
LVLEAEIVEIWEDKDSEVALCVVKLEASGNNINEEMKPFWKANKETGDSAFSNLCKPLKE
NRSSNNNLGLCLKKESSAVSGLAQEENESALFCSDPYLGVTSECLETAEANVSVGAASGK
VDDGYEIGERENSFDKEIPLSEGDSDNTVLLEPMRSCSPHIVGNGIKAAEQDLSEILFGE
EAELKAGVTGSGAPATSLCLGKEQELQRLPVFQAQPSASNGTEALGELDPLEMHLSCDHL
NKPLQELEGVLEKSPSDEGTKEALEAKSLEMQAASGSEARETVLDQELLELPDVRNETGQ
LTALNCLEILPLLDEKENLLPSVTGASADRERSVELIPSDVQPSLGEKTKKLQVNLSGIH
EEEATLDDWMEADPPSLMLSSSCGRPEKELHQKMHDNQSMLGAKFEPFLELMLPDVQPPQ
EDREEDLLMLERAVLQSSANSGSQFSFLSKDSANQRAVFTRKSCDCKVEKHKGWKKKDDC
VEEWMEQDLTESFKESGGLCVQSLGCQPGEDKKQNENLADGSAAQDYPCNLKGFAVGSKC
VVWTSLKWCDARILEVSEKGTKVLNLCSGNEEIVHPENVWNGIPDQGRRSSEALTPATEN
LQPLPEESLLQEKQTDCSSNLAEDPHVLQEC
NT seq
6936 nt
NT seq
+upstream
nt +downstream
nt
atgagttccggcccaggatccctcggccgcggcgatacaatcaccctgcgggtccgcgcc
gtggggctgtgccccgaggtgcccatcctgcggctgtgggggctgctcggtgaacgtaaa
gctgactatgctctcctctaccgcgagatccaggcggcggccgggccgcacctggaggcc
cgcccagagcccagcgggccgggggccagcgggcctaggctgtgcccaggagagctggca
ctagtggaggtgttgggtgtgtggtaccgctgctgtgtggtgagttgtagtgcccagggg
taccgtgtcttcctgctggacgagggatacgtggtgaccacatccgactgttacttggca
cggggctgctcagagctgttccagctgcccccggaggtgctgggctgtgttgtggccgat
gtcatgccctcccacagtcacgaggggacagcaagtggggattcaccagtgcccaagtgg
accacagaggcaatggagttcctcagcttcctgcacggcaaggaggtgtctggtgtggtg
caggaggtgataacaccacagctcattgtgcttgagctgccccagcttgtggcccagatg
cggcagctgggcctggccagacgtgtctcttacagctgcttctgccagatgttcaggcgt
tgcctgccttttgcccagttaaagaagcagctctgtcaagagcctccagcgtgttccctt
ggagcttttgcggttccgcagcttgtccgtgcattgctctcataccggcctctgtcacct
gccttggattattactaccctcagcttcagttgggtgtgactgagcctgtcctagtgacc
catgtctctgacccacaccacgtttactgccagttgcagtgcctgtcacaggagatctgt
tgcctttctgataccatgtgccatgcttatgactggtgggagcaggacttactgcccaaa
gtgggctcaccctgtgctgcccgtgggatggatggccagtggtaccgtgctattctgctg
gagctcattgctggggagcaggaccagcatgcagctgttgtgatctttgtggactatggc
aagaaggagactgtgaccagagctgacctgcgccatttgcctgcccagtgttttcgcatg
cctgtggtcacttacgcgtgtgctcttcagggtgtttcagatgggggctgtggctggtcc
ccattgcaggttgatttgctgaaggcgttggtgctcggtagaggagtgactgctcacatc
aaagcttttaactcctttgagcatctctattatgtgaccctctatggggaaaatggtgtt
gatttgaaccatctttttgggtctcaggcttgctgcctggtcagcagtcacgtgagccaa
actgaggctcatgagcagctggaagtagaggaatccttagttgaagaattggaattgcca
ctagaagcacctcccgttttaacacacggagatttggctgctgtagctggtgtgcatctg
aagacctggacattgtacaacgcacaggtctcccacctccgagacccatctgagttctgg
ctgcaactccatgagtattaccagctcttcaggcagctgaggcagtgcatgtggaatttt
tattcccattccacaaagctggatgaggctgggtgggacccacagcctggatccctttgt
tgtgccagtgggaacgagggtgtcttttatcgagcagtggtcaacagggtcctggacacc
agagtggaaatacacctggtggacagaggcagtacagaaactgtggatctgtgtgctgtg
agggagctgctccctcgcttcagggaactgcctgctttagctctgaagtgttgtttggca
ggtgtctcccctccaagagggagttggagtgaagcttctgtgtctgcattcagggagatg
gtactgaacaaggaattaaaggtttggtttttgaatgtgcagggtgacaaatatgtggtt
gaaatttttgaccagtcccagttaggagaggaaagagtaagtaaactcatggcccagggg
ggttatgctaaataccagagatatgaagtacccaagacttaccagaaatcagataagtct
gtgacacaggtctctcccctagtgcatgctgcagaggaaagccaaataaacgcagagaag
aggttcagagaagaatgtgatctaaagagcagtgatagaatacttgattctcacatgggt
gtgatggtcagagagagccctgttgcagccattcacaattccaaaagtagtgaatctctt
ctttctcgagactatgagggtaaggaaaatctgcacacctctttgagacagaactatgtg
gaaattaagccaggctcctcctgtggaggtcacctagaagtgggaagtacagttaatgtt
attttgtcatatgttgagaatcctagttgtttttggtgtcagttaagtagaaattgcaat
gaccttgaggaactaatgaatgaaattcaggagcattgcaagaattcatcccagccacat
gtttggccaaatcttgtgtgtttagcccaatactcagaggataaaaaatggtacagggct
ttaatagttagtgaaggagtttgtgcagataaagtagaagtcatctatgttgactatggc
aacagggagcaggtatgtctaacgaagctccgtgcaattaatgaacgcttccttaggtta
gaggctcaggcattcaggtgcagcctttacaacttaatccaaccgaatggtcagaatcct
tttgcttgggatgaagaagcaattcaggctttccgtcagtttgttgttgattcatcatct
gaccttgaccttaaatgtacaatctttgccttggcttcaataaatcgggacctgtttaac
attgtagatttaatcacaccttttcagagtgcttgccagtttctcactgagagaggtgta
gccagacgtttatttccccaaaagcatctggaatctttggtccagcttcactctttctat
tattctagtcacggtattaaaattgggagtgaggaggatgtttatattacacatgttgag
aatccatggacattttactgccaacttgaaaggtgtgcagataccttggcacagctggct
gataacatcagttgcctgagtgagaaaatgaccagcacaggaaccttggggaagtctggg
accctgtgtctagcaaggtactctgacagtcagtggtataggggagtaattatagaaaga
caacctaagactaaagtattctttgtggattttgggaacacagagacaatagagacagat
gatctgcttattttacccaacgatgcttctgatatcttgcttgtgccaatgcaggccgta
aagtgtgctgtgtctgatgtagcatctgtttccaaaaaagctgcaatgtggtttaaggaa
gctgtcctggaaaggagattaaaagcaatagtggtagcaaaggactcagataatacactg
ctggttgagttgtttgatagaaatactcaaattaatacaaaactgaaagagctaagccta
aacagtacaggactgtgtagtcatgtacataatgagacttcgtgctctagtaatacagat
gtgaatgagaaggatgagacttcaaatgcaggtaggcctcttgaaagaaaaaaatgtcaa
cctgaagcccagcaagaacaagggagcaaaagaccattcaaagaagttgtaaacattttc
cagcactctgggaagggagatgaggcagctgggttactagaacctgatgagatgcttagc
agtaaggacgatgcttttatattgaataaagcaggagaggagtctctgctcttttcccag
atggatactctgtcagatactaaatctcctgctgaaggcaggtgtctaatgcttaaaaat
gcttctgatctaccaccacagaagatagtgccagctcttaaaaccttagtgtatgtgtct
tacgtcagcgacccgcaggatttttatgttcaactggggagtgatgaggttcagcttaac
aacattttggaaagtttaaacaatgggaaatcagtgaaggacccttgtggacagcttttc
caagcaggagatttaatcagtgctgtttattcagaagacagcctgtggtatcgagctgta
gtgaaagagaagacttccaacaattcaatacgggtacattatattgattatggtgatact
tctgtgattagtgttgatcaagcacgtaggctccctaagaacttgtcatctattccagca
atgagcattcactgcttcctgggcggactcaaatgcaaaaaaaatgcagactggacagag
aaagcagtgttttacttcaccaagagaacaagtgaaatcctgctgtcgtgtgaatttgta
aagaaggttgaggataaatgggaagttattctcagtgaccatcaaggtataataacagtg
gatttagctgataaagacattccaagtagagaaagacttttctcaagaaaaaaaattgat
aaaagagagaaccgtggcatgatcactggctgtgagcctgtgcctcctcaggtacaaaat
gagatttcttgtgtaagtgattgtaaatcctttagctggaaatttccagaggcaggtcag
actttaaaaatttatgtcacagtggtaaatagtccaggatacttctggtgtcaccgtgct
gataccaaagatgtgagctacattgagaaaaaaatagaggaagctgaaaagcttggacta
agctctctgaacgatggcaagtcttgtatgaaaagtggtgatacttgtctagcaaaatac
agtcaagatgggtggttctacagagctcagatcagcagtgtgaatgatgacagtgtagtg
gttagacacgtggattatggaagtgaggaaagcgtcagcctggagatgatccgacagatg
ccatatgaactgctcagagtacctgggcaagcatttgcttgctgtctctcaggtttcaat
ccctcagacggctcatggcttagtgaagcaagtaagaagttttatgatctgactgaaaat
cttgtgttagaggctgaaatagtagaaatttgggaagataaagattctgaagtcgctctg
tgtgttgtcaagctggaagcttctggcaataatattaatgaagagatgaagcctttttgg
aaggctaataaagaaactggtgacagtgctttctcaaacctttgcaagcccctaaaggaa
aacagaagttcaaacaacaatttgggtctttgtctcaaaaaagaaagttctgctgttagt
ggattagctcaggaagaaaatgaaagtgctttattttgttctgatccttacctgggtgta
acttctgagtgcttagaaactgcagaagcaaatgtgtcagtgggagctgccagtgggaag
gttgatgatggatatgaaataggagagcgtgagaacagttttgataaagagatacctctg
tctgaaggtgatagtgataacactgtgctactggaaccaatgagaagctgcagccctcat
attgtggggaatggaataaaagctgcagagcaagacctgtctgaaatactgtttggagag
gaggcggagctgaaagcaggagtgacaggcagtggtgctccagcaaccagcctttgccta
ggaaaagagcaagaattgcagaggttgccagtgttccaggcacagccatctgcaagcaat
ggaactgaggcattaggagaactggatccattagaaatgcacttatcatgtgatcatcta
aacaagcccttacaggagctagagggagttttggaaaagtccccctctgatgaaggaaca
aaggaagcactggaagcaaagtctcttgaaatgcaggcagcatcaggcagtgaagcaaga
gagacagtgttggaccaggaattgctggagctgccagatgtgaggaatgagacaggacag
ttgacagctctgaactgtcttgaaattttaccattacttgatgagaaagaaaacctgctg
ccttcagttactggtgcctctgctgacagagagaggtcagtagagctgattccatctgat
gttcagccttctttgggagagaagaccaagaaactgcaagtgaatttgtctggaatccat
gaagaagaagctacattagatgattggatggaagcagaccctccttccctaatgttgtca
tcatcttgtggtagacctgagaaagaactgcaccagaagatgcatgacaaccagtcaatg
cttggagccaaatttgagccctttctggaactgatgctgcctgatgttcagcctcctcag
gaagacagggaggaggacttgttaatgctggaacgtgctgtgctacagagttctgcaaat
agtggaagtcaattttcatttctttcaaaagactcagcaaatcaaagggctgttttcact
aggaaatcatgtgactgtaaagttgagaagcataaggggtggaagaagaaggatgactgt
gtggaagaatggatggaacaagacttgactgaatcatttaaagagagtggaggtctgtgt
gttcagtctttaggctgtcagcctggggaagacaaaaagcaaaatgagaacttggctgac
ggcagtgcagcacaagattatccttgtaatctgaagggttttgctgttggttccaaatgt
gtggtgtggacttctctcaaatggtgtgatgctcgcattttggaggtatctgagaagggt
accaaggtcttgaacctctgcagtggcaatgaggagattgttcatcctgagaacgtctgg
aatggaattcctgaccagggtcgcagatcatctgaggcattaacccctgcaacagaaaac
ttgcagcccttaccagaggagtccttacttcaagaaaagcaaactgactgcagtagcaat
ttagctgaagatcctcacgtcctccaggagtgctga
DBGET
integrated database retrieval system
