Sylvia atricapilla (blackcap): 136359020
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Entry
136359020 CDS
T10263
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136359020 (ZEB1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
136359020 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
136359020
NCBI-ProteinID:
XP_066171367
LinkDB
All DBs
Position
1:complement(14705986..14828701)
Genome browser
AA seq
1112 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSEREGSTNSCWEDEAGKERKEILGPEAQTNEIGCTVKEDECDSDAENE
QNHDPNVEEFLKQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSIPTNSCKNEKLPEDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGTEAEKPESPVPSETGENSLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKLSSPADND
DQAATTNVDEPQNSTNNSENPVSTTKSQTLPGASTLNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVHETPPKQTQANGNQDERQDTSSEGISNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKRETEERDSAEPEEMGAEILSSEHVVVRASPSQ
IDSDERESLTREEEEYSEKEEEEEEEKDIEGLQEEKECRELQEVGDAEEEAAVEEEDGKT
EGSKNDEAISQASNAEPEVIQNNGQVSEENNE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattacaacaatgtggtagaagcaaactcagattcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacggatgcagcagactgtgatgctagtgtgccagaagat
gacttgccaacggaccatatagtattaccagaaaacagtgaaagagaagggagtacaaac
agttgctgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acaaatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgag
caaaaccatgaccctaatgttgaagagttccttaaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacgccagaagctagtggtcaggatgaa
aatggaacacctgacgcgttttcccagctgctcacgtgcccgtactgcgatcgagggtac
aagcgtttcacctctctgaaggaacacatcaaataccgccatgaaaagaacgaagataac
ttcagctgctccttgtgcagttacacgtttgcgtacagaacgcagcttgaccgccacatg
acatcacacaaatcaggaagagatccaagacatgtgacgcagtccagtggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaac
ggtcgagcccggtcagggcttaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcaacccctttgcagaatggggtttttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggct
gtggatggtaatgtaataaggcaagtactggaaaacaatcatgctaatcttgcgtccaaa
gaacaagaaaccatcaacaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcctg
gagcagccaagtcagcttcaggttgttccacaaaatctaaaaaaagaaaactctattcct
acaaatagttgcaaaaatgagaaattaccagaagatctcacagtgaaatctgagaaagat
aagaactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggaacagaagctgagaaacccgagtcccctgtcccatcagaaaccggggag
aacagcttgtctcctggtcagccacctttaaagaaccttctatcgctcctaaaggcgtat
tatgcattaaatgcacaaccaagcgcagaagagctttcaaaaatagcagattccgtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacaaatctctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagtcctgcagacaatgat
gatcaagcagcaactacaaatgtggatgaaccccagaacagcacaaataactcagaaaat
cctgtcagtacaacaaaatctcagactttaccaggggcttcaactctgaatggttcacat
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacagcagagggtgtacaagaagagccacaaatagaacctcttgacctttcgcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactctaccacagttagtcctgcagttcatgagacaccaccaaaa
cagacccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaatatcc
aatgtagaagatcaaaacgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcatta
ttgagacataagtatgaacacacaggtaaaagacctcatgagtgtggaatctgtacaaaa
gcatttaaacacaaacaccatttgatcgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcacactcggggtcttactctcagcacatg
aaccatcgctactcctactgcaaaagggagacggaggagcgcgacagcgccgagcccgag
gagatgggcgcggagatcctgagcagcgagcacgtggtggtcagggcatcgccctcgcag
atcgactccgatgagagggagagcctcaccagggaagaggaggagtacagtgaaaaggag
gaagaggaggaagaagaaaaagacatagagggacttcaggaagaaaaagaatgtagggaa
ctacaagaagtaggggatgcagaagaagaagcagcagtagaagaggaagatgggaaaact
gaaggtagcaagaatgatgaagctataagccaagcaagcaatgcagaaccagaagttata
caaaataatgggcaggtttcagaagaaaataatgaataa
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integrated database retrieval system
