Sylvia atricapilla (blackcap): 136359103
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Entry
136359103 CDS
T10263
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like 1 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136359103 (TBPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136359103 (TBPL1)
03021 Transcription machinery [BR:
sati03021
]
136359103 (TBPL1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
136359103 (TBPL1)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136359103 (TBPL1)
RNA polymerase III system
TFIIIB
136359103 (TBPL1)
RNA polymerase I system
SL1/TIF-1B
136359103 (TBPL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
136359103
NCBI-ProteinID:
XP_066171520
UniProt:
A0A7K7E0K4
LinkDB
All DBs
Position
3:55970893..55984028
Genome browser
AA seq
183 aa
AA seq
DB search
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggacagtgatgttgcactggacattttaatcacaaatgtagtgtgtgttttt
agaacaagatgccatttaaacttgaggaagattgcattagagggagcaaatgtgatatac
aagcgtgatgttgggaaggttttaatgaagcttaggaaacctaggattacggccacaatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaatttggt
gccagacgactagctcgcagtctacaaaaactgggttttcaggtaattttcacagatttt
aaagttgtgaatgttttagcagtgtgcaacatgccctttgagatcagattgccagaattt
acgaagaataacagacctcatgcgagttatgaaccagaacttcatcctgccgtgtgttac
agaataaaatctctcagagctaccttacagattttttccacaggcagtatcacagttaca
gggccaaacgtaaaggctgttgccagtgctgtggaacagatttatccattcgtgtttgaa
agcaggaaataa
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