Sylvia atricapilla (blackcap): 136359113
Help
Entry
136359113 CDS
T10263
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03018
RNA degradation
Brite
Enzymes [BR:
sati01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
136359113 (PNLDC1)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136359113 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136359113
NCBI-ProteinID:
XP_066171539
LinkDB
All DBs
Position
3:complement(56867768..56879235)
Genome browser
AA seq
532 aa
AA seq
DB search
MEVGAEGFAWRLPRLRRRILRAAFVALDTEFTGLHSTSLQNNEPSLFDSPAERYEKARQS
VQHFTVVQLGLAIFSKENSNKYVVHSYNFFLFPSTLGIRDVEFTLSASSIQFLSHYGFDY
NKFLKDGIPYMNEVQEKVLRQHLLADTWKVCSTSSADKDVLKKAIDEVTSWIAAAKEEDT
MILQDLNGYQMLDVQLVLRQALENVWTEPLGDKKVMVKKVSPEYRQLLENSPYDHCQKKL
VLLSARGFTNVFQILVKAKKPLVGHNMLMDLMHLHDKFYRPLPESYEEFKRNIHNLFPVI
IDTKTVTKYVQKKCLFPRVSSLLEVYTVLCSSNLNPKGPPCPVIALASGCSRYAENTFPH
EAGYDAFLCGSVFLMSAHLLLCRSTDDTVEADPSLSQYLTVLAEHVNKVNFIRGGVSSIN
FSGEDAPCHHPPALVVHVRGWPGLTERQIYHEFKARCRFDVRRLSKNQFILLSNKYKQVR
LVLRDYRHHPHLQVSVYRHWRHSPSVNCLLQISGVVALWSVLAFVLGGARSC
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgggcgcggagggctttgcctggcgcctgccgcgcctcaggcgccgcatcctc
cgtgccgccttcgtggcccttgatacggagtttactggtttgcattcaacttccctgcaa
aacaacgagcccagcctgtttgactcccctgcggagcggtatgagaaggccaggcagagt
gttcagcacttcactgttgttcagcttgggctggcaatattctcaaaagaaaattcaaac
aagtatgtggtccattcatacaacttttttctctttccctcaacactgggaataagggat
gttgaattcaccctctctgcatctagtattcagttcctgtctcattatggctttgactac
aacaagttcctcaaagatggaatcccgtacatgaatgaggtgcaggagaaggtcctgagg
cagcacctcttggcagacacctggaaagtctgcagcactagtagtgcagacaaggatgtc
ctgaaaaaagctattgatgaagtgacctcttggatagctgcagcaaaagaagaggatact
atgattctgcaggatctgaatggctatcagatgcttgacgttcagctggttctgaggcag
gctcttgaaaatgtttggacagaacctcttggagacaagaaggtaatggtgaaaaaagtg
agtccagagtaccgtcagcttctggagaactctccttatgaccactgtcagaaaaagctc
gttctcctctctgcccggggcttcaccaatgtcttccagatacttgttaaagccaagaag
cccctggtgggacacaacatgcttatggaccttatgcatcttcatgacaagttctacagg
cccctcccagaaagctatgaggagtttaaaaggaacattcacaacctgtttcctgtcatc
atagataccaagactgtaacaaaatatgtgcaaaagaaatgtctgtttcctcgagtatct
agtcttttggaggtgtatacagttttgtgcagcagcaacctgaatcccaaaggtccaccg
tgccctgttatagctcttgcaagtggctgctcaagatatgctgagaacacatttcctcat
gaggcaggctatgatgcttttctctgtggttcagtttttctgatgtcagctcatttgcta
ctgtgcagatccacagatgatacagtggaggctgatccttctctctcgcagtatctcacc
gtgttagctgagcatgtgaacaaagtgaatttcatccgagggggtgtttcaagcattaat
ttttctggggaagatgctccttgccatcatccccctgccttggttgttcatgtccgaggc
tggccagggctgactgagaggcagatttaccacgagtttaaagctcgttgtcgctttgat
gtcagacggctttcaaagaaccagttcattctgctctccaataaatacaagcaggtcagg
ctcgtcctgcgggattacagacaccaccctcacctgcaggtctccgtctatcgccactgg
aggcactcgccgagcgtgaactgcctgctgcaaatctctggtgttgtggcactgtggtct
gtcttggcctttgtgcttggaggagctcgtagttgttga
DBGET
integrated database retrieval system
