Sylvia atricapilla (blackcap): 136359363
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Entry
136359363 CDS
T10263
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136359363 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sati04812
]
136359363 (SPAST)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
136359363 (SPAST)
Membrane trafficking [BR:
sati04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136359363 (SPAST)
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
136359363 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
MIT
AbLIM_anchor
IstB_IS21
AAA_24
NPHP3_N
DUF815
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
136359363
NCBI-ProteinID:
XP_066172036
LinkDB
All DBs
Position
3:complement(80187633..80221586)
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AA seq
612 aa
AA seq
DB search
MNSPGGRGKKKGSAGSSSAPPTAGASPSSPPGPAPPVPPAGAAAAASPHKRNLYYFSYPL
FAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGDAPEPGGAPETVRACHKRA
FECISMALRIDEDETAGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMRT
NLAMAKDRLQLLEKLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTAAKTGSTGLSGHHRTPSYSGVSSSVSRPAPNPAPSAHKAAPKNSRTNKPSTP
TTAPRKKKDTKIFRNVDSNLANLILNEVVDSGPAVKFDDIAGQELAKQALQEIVILPSLR
PELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR
ALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMG
ATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGY
SGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAY
IRWNKDFGDTTV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggcggccgagggaagaagaagggctcggccggctccagttccgcgcct
ccgactgccggcgcctctccctcctcgccgcccgggccggcgccccccgtgccgccggcg
ggggcggcggcggcggcgtccccgcacaagcggaacctgtactacttctcgtacccgctc
ttcgcagccttcgccctgctccgcttcgtcgccttccagctcgggctgctcttcgcctgg
ctctgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggggcc
ggcgacgcgcccgagcccggcggggcgcccgagacggtgcgggcgtgccacaagcgggcc
ttcgagtgcatctccatggctctgcgcatcgacgaggacgagacagcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgatcagtgtgaacgggctcgacgtctccagtctaaaatgaggaca
aatttggcaatggccaaggatcggttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcagttccaaaaaagaaggatcccttaacacacacgagt
aattcccttcctcgttcaaagactgctgcaaaaactggatccacgggcctttcaggtcac
cacagaacgcccagctacagtggggtatcatcatctgtgtctagaccagcacctaatcct
gcaccttcagctcacaaggctgctcctaaaaatagcagaacaaataagccttctactcct
accactgctcctcgaaaaaagaaagacacaaagatatttagaaatgtggacagcaatctt
gctaatcttatcctaaatgaagttgttgatagtgggccagctgtcaagtttgatgatatc
gcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttctcttagg
cccgagttatttacaggtctgagagctcctgcacgtggtttattgctgtttggcccacca
ggaaatgggaagacaatgctggccaaagcagttgctgcagaatcaaatgctactttcttt
aacatcagtgcagcgagcctgacttcaaaatatgtgggtgaaggggagaaactggtgcgt
gctctatttgcagtagccagagaactccaaccttctataatttttattgatgaagttgat
agccttttgtgtgaaagacgagaaggtgaacatgatgctagcaggcgtctaaaaacagaa
tttttaatagaatttgatggtgtgcagtcttctggagaagacagaatacttgtgatggga
gcaacaaacaggcctcaggagcttgacgatgctgttctcagacgattcaccaaacgggtg
tacgtgtctttaccaaatgaggaaacaagattgattttactaaaaaaccttctaagcaag
caaggaagtccattaacccaaaaagagttggctcaactagctagaatgacagatggatac
tctggaagtgacctaactgcattagcaaaggatgcagcactgggccccattcgagaatta
aaaccagaacaggtgaagaacatgtctgccagtgagatgagaaatatcaaactgtcggat
ttcacagaatccttgaagaagataaagcgcagcttgagcccgcagaccctggaagcgtac
atccgctggaacaaggactttggagataccacagtgtga
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