Sylvia atricapilla (blackcap): 136359452
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Entry
136359452 CDS
T10263
Symbol
LRPPRC
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sati03029
]
136359452 (LRPPRC)
Mitochondrial biogenesis [BR:
sati03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
136359452 (LRPPRC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_1
PPR_long
ANAPC3
Motif
Other DBs
NCBI-GeneID:
136359452
NCBI-ProteinID:
XP_066172188
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Position
3:88165484..88252856
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AA seq
1418 aa
AA seq
DB search
MPERALSGSGLSASPVRGMVRPRHVGPAAAQRRRATHVLRAVMAALLSSAGRLRALRPRL
SPLLPPLLRPPAAPAPPPGPARHIMNQVRFLTVAPQEEGNVKQEPVSEVGTRPSWQFDWA
LNKVDNSVRKTGRIPKALLLKIFQEVSKAGCPGSNQTLLLLQSCGAVLPEVLSPERTELA
HMIWDKMKELGAVYDTSHYNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQRLIAA
YCNEGDIEGASKILGFMKSKDLPITEAVFSSLVKGHARSGDMKSAENILSVMRMAGVEPG
PDTYLSLLNVYAEKGDVDSIKKTLEQVEKTEGYLMDRILMQVIFSLAKAGFPQHIEGIRE
RIRFERELIPDVMNLCLTLITHGFEDISFSILKSLGHLSREDTDQGSFFLQHCVNRDLPM
SKLKQFCKELKEAKMHSAPLPFILRCALEANKSALAIDVMKMMKEEGLPLRPHYCWPLLV
AYEKEKNLKGIFEVLKSMHKLGVDLDAETYTDYVFKNFADIETAHAQLKENGCLFESVGL
YLAELRSEALQGRLDKVLSILSSANTPALDCRLFRNSLILAFKRSDDVQLWSKITELLYK
DERYCLTPPGPTEAVGYFLYHLIDSMSDSEVQAKEELLRQYFHQLKKMNVVIPTSHYSGI
CRLLDSSQVPELIKDVRLLCHKKSLSTDNIPESAKSDVSALENKLEKQKAENQPITDVLK
QLILALCEEENMQKALEVKAKYEPDMVVGGYAALINLCCRHDNVEEAMNLKEKVFPRNSP
VALDSGKYVALIEVLEKHGRLEDAINILTEMKEKDVPISGRTVASFLHILNAAAMRGEVE
RVNRLHDAIANLGLVQTAALHAPLITVHLEKDDMPAALEALISCYKKYGKNPQLHNIYCK
LVEKGDADLLQKVSDFISREYGDMMALYDLFFAFLQTGKYKEAKKVIETPGLRAHSGRLR
WFAKRCILGEQMEVLEQLVELTRNLFDCDRDEMYYHLLELCDSNKDWGKAEAIWTKIQEE
NIVPREKTLILLANILKKNGQVVPFEVPKGSPEDSTSAATGELEIRMLCKQNKVKEAYSI
FRKMQKDESHRRCCTMLVKALLAQDFLDEALDVKRIAETHIKGFTLNSAASSLLIISQVR
RDYLKDALAVLKKVLDSGMLPTRQAVFALTEALAEKRDIKNLQVLGGILGDVTKSLGLSG
SLIPNAIALAHTKNNDLDAAVKYLEPLLISGAQNPDQAARSISYLLRKVSEEGLEPALEK
FGAMAERLAGQCGIYKPVTDLFLQYISADRVDDARSLIQKWDAIAQEKRTLGRFMAGSAT
KPGQAKRIEALLELIPEHLNLAVAYRYLLRCYELDGDVASVKATYEKTKAKNIELNEISL
KSLATFLKQVGEPVPFTEPPETFKFYAEKWKNRRLEAS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcgggccctttccgggtccgggctcagcgcctcccccgtgaggggaatggtt
cgcccccgtcacgtggggccggcggcggcgcagcgccggcgcgcgactcacgtgctgaga
gcggtgatggccgcgctgctgagctccgccgggcgcctccgggcgctgcgcccgcgcctc
tcgccgctgctcccgccgctcctccgcccgcccgccgccccagccccgccgcccggcccc
gccagacacattatgaatcaggtaaggttccttacagttgcacctcaagaggaaggaaat
gttaaacaagaaccagtttcagaagttggaaccagaccaagctggcagtttgactgggca
ttaaataaagtggataactctgtcaggaaaactggccgcatccctaaagctcttctacta
aaaatcttccaggaagtaagcaaagcagggtgtccagggagtaaccagaccttgcttttg
ttacaaagttgtggtgctgtcttaccagaggtattgtcacctgaaagaacagaactggcc
catatgatatgggacaagatgaaagaacttggtgctgtgtatgatacaagccattacaat
gctttgcttaaagtctatcttcagaatgagcacaagttttctccgacagaattcttggcc
aggatggaggaagccaatgtgcagcccaatcgagttacataccaaaggttgattgctgct
tattgcaatgagggcgacattgaaggagcaagtaagattcttggatttatgaagagcaaa
gatctccccatcactgaggcagtattcagtagccttgtgaaaggacatgcacgatcagga
gatatgaagagtgcagaaaacatcctttcagtgatgaggatggctggtgttgaaccaggt
ccagacacctatttatcactgctgaatgtgtatgctgaaaagggtgatgttgatagcatc
aaaaagactctagagcaggttgagaagactgaagggtaccttatggacaggattttgatg
caggtgatttttagccttgccaaggctggtttcccacagcacatcgagggtattagagag
cgcataagatttgaacgggaattaattccagatgtaatgaacctgtgtttgactctgata
actcacggctttgaagatatcagcttcagcattttgaagtctttaggtcatttatcacgt
gaagatacggaccaaggtagcttcttcttgcaacattgtgtaaatagagatctgcctatg
agcaagctgaagcagttctgtaaagaattaaaagaagcgaagatgcactcggcaccgtta
ccatttatcttgcgttgtgctttggaggccaacaaatcggctttggccattgatgtgatg
aagatgatgaaggaagaaggcttgccactcagacctcactattgctggccactgctagtt
gcatacgagaaagagaaaaatcttaaaggtatctttgaggtcctcaaatcgatgcacaaa
ttgggggtggaccttgatgcagaaacatacacagactatgtttttaaaaactttgctgat
attgaaactgcccatgcccagctgaaggaaaatggctgcctgtttgaaagcgttgggctc
tatttagcagagctaagaagtgaagcgctacaggggaggctggacaaagttctttctata
ttatcttcagcaaacacacctgcccttgattgtcgtctgtttagaaacagcctcattttg
gcctttaaaagatcagatgatgtacagctgtggagcaagataacagaactcttgtacaag
gatgaacgttattgcctgacgcctccaggaccaactgaagctgttggctattttctttat
cacttgattgacagcatgagtgactcagaggtacaggccaaggaggagcttttgagacaa
tacttccatcagctgaagaagatgaatgtagttatccctacgagccactacagcggcatt
tgcagactgctggactcctctcaagttcccgaattaattaaggatgtaaggttactgtgt
cataaaaaatccctgtctacagacaacattccagaaagtgctaaatctgacgtgtctgct
ttggagaacaaactagaaaagcaaaaagctgaaaaccagcctattacagatgtcttgaaa
caactcatacttgctctttgtgaagaagagaatatgcaaaaagcccttgaagtgaaagcc
aaatacgaaccggacatggttgtcggtggctatgcagccttaataaatttgtgctgtcga
catgataatgtagaagaggcaatgaacctgaaagaaaaagtcttccctaggaattcacct
gttgctcttgacagtggaaagtacgtagcactgatagaagtcttagaaaagcatggtaga
ctagaagatgctattaacattctaacggagatgaaagagaaggatgttcctatctcaggc
agaacggttgcatcttttctccacatccttaatgccgctgccatgcgaggtgaagttgaa
agagtgaatcgattacatgatgccattgcaaacctgggcttggtgcagactgctgccctt
catgcccctctgattacagttcaccttgaaaaggatgacatgcctgcagctctggaagct
ttaatcagctgttacaagaagtatggtaaaaatcctcaacttcataacatctactgtaaa
ctggtagaaaaaggagatgctgatctgctgcaaaaggtttcagattttataagcagagaa
tatggtgacatgatggctctttacgatctcttcttcgccttcttgcaaacaggaaaatac
aaagaggccaagaaggtcatcgagacacctggcttgagagcacactctggaagattgcgc
tggtttgcaaaaaggtgtatattgggtgaacagatggaagttttggaacagttggtagaa
ttaactcggaatctgtttgattgtgatagagatgagatgtactaccacctgcttgaactg
tgtgacagcaacaaagactggggaaaggctgaagctatttggactaaaattcaggaagaa
aatattgttcctcgtgagaagacactaattttacttgccaatatacttaagaaaaatggt
caggtggttccatttgaggtacctaaaggtagccctgaagatagcacaagtgctgctact
ggagaactggaaatacggatgctttgcaagcaaaataaagtaaaagaggcctacagtatc
ttcaggaaaatgcagaaggatgagtctcatcgtcgttgctgtaccatgctggtaaaagca
ttgttagcacaggatttccttgatgaagcccttgatgtgaaacgcattgctgagacccac
atcaagggcttcacactgaacagtgctgccagcagcctcctcatcatatcgcaagttagg
cgggattatttgaaagatgccttggctgttttaaaaaaagtgcttgacagtggtatgttg
cctactagacaagcagtttttgctctcactgaggccctggcagaaaaaagagatataaag
aacctgcaggtacttggaggaatcctgggagacgtcacaaaatcacttggtttatctggc
tcactaatacctaatgcaattgcattggctcatactaaaaacaatgaccttgatgctgct
gtgaaataccttgagcctctgcttatctctggtgcacagaatcccgatcaagctgccaga
agtatttcctatttgttaagaaaggtgtctgaggaaggattagaaccagctttggaaaaa
tttggtgcgatggcagaacgactggccggtcaatgtggaatttacaaacctgtcacagat
cttttccttcagtatatcagtgcagacagagtggatgatgccagatcgttgatacagaag
tgggatgcaatagctcaggagaagagaactttagggcgttttatggctggatcagcaact
aaacctggacaggcaaagaggattgaggcacttctagaactgatccctgagcatctcaat
ctagcagtggcgtaccggtacctcttgagatgttatgaattggatggggatgttgcttct
gtaaaggctacttatgagaaaacaaaagcgaagaacatagagctgaacgagatctctttg
aaatctttagcaactttcctgaagcaagtaggagagcctgtccctttcactgaaccccct
gagacattcaagttctatgcggaaaaatggaagaacagaagattggaagcatcatga
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