Sylvia atricapilla (blackcap): 136359476
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Entry
136359476 CDS
T10263
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136359476 (TRERF1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
136359476 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
DUF7952
Myb_DNA-bind_7
PixA
Zn_SUZ12
zf-C2H2_2
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
136359476
NCBI-ProteinID:
XP_066172227
LinkDB
All DBs
Position
3:90654371..90752989
Genome browser
AA seq
1162 aa
AA seq
DB search
MGDQQLYKTNHTANNNENLYYEQHQMNSLPSLNHSYGTSVMDAPQASPLSPPFPQDSRDS
IALPVGSKSLGSMDASRQTSWTHSGSGNHVPARNSFNNQSAMWSPLGQGESHDGYQYPYP
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNSSDSALRQLL
SQKPPVEQQPVTSTVQRYQPVPQQTHQSFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGQAHVPQMQSQQLLPQQMQHLQQPQYYAQPQQGHQRLSIQEIQQQQPARQQRQCP
VQLAQYYQTQPVMQQLQQQQQQMQLPLPPYHREPDPKTMHEPHQYSQDPSHPVQLIQLGA
VPQYCFQDPHEQYRHLYPQSLLQQQDQQKQYLSESRVPSLNSHIGLTPPETADDPARQEI
NSVGNAAPHRTLLPPSGVHLNNKSSQQDSPSTTWSQPVQLSDGRLQPLSPEQSGQNRETL
PERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLPKEVDG
LAPIVMPVSVPVKLLSPEPSTQPSASTATVTDKPANSVSDDEMPVLVKMTYSPPCSPKVA
NPCSSSETSKKPHPSAVKLEENFKPLQDKKKYRHRPEPLFIPPPSFNLSMSHSGATLYQS
QLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVLTSHSTSHTQLPLTPLTPT
PRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVHKATLV
WKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEKLLLRK
PVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCVEYYYT
WKKILRLGRKHRTRLEKKRDECLTSGEEEVLEEDEEIEDDRKEEREMQKSPDPPAISLVG
PIDLPAVQGLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCPMAGTKQK
SGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGRVFFKIKSRNAHMKTHRQQEEQQRQ
KAQKAAVAAEMAATIARTTGPAGHSLIPLDHMSLVKHVENVGDIDDDVVPDLGDVMEENE
VMDADLLLDDEDPDLLQDDAEL
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaatcatactgccaacaacaatgagaacttgtac
tacgaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacatctgtt
atggatgctccccaggcgtctcccctctcccctccatttccccaagattcaagggacagt
atagctttgcctgtaggttcaaaaagtcttgggtcgatggatgcatctagacaaaccagt
tggacacattctggctcaggaaaccatgtcccagcgaggaacagtttcaataatcaaagc
gcaatgtggagccccctcgggcagggggaatcccatgatggataccaatatccttaccct
caacccagtgaaaaccgatcgcaaaaaattaccagtggggtcctgcacaaattggactcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcaacaacatggctcaggtt
ctgcacaccgagtcttcaatggtggataattccagtgacagtgctctcaggcagctgctc
tcccagaagccgcctgttgagcaacagcccgtaacttccaccgtacaaagataccaacca
gtgccacagcaaacacaccagagttttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtactacgactaccagcagcacttatcacagatgcagatgcat
tctgcgttccagcagggacaggcgcacgttccacaaatgcagtcccagcagctcctacca
caacagatgcagcacttgcagcagcctcagtactacgctcagccccagcagggacaccag
cggctctccatccaggagatccagcagcagcagccagctcggcagcagcggcagtgtccg
gtgcagctcgctcagtattaccaaacacaacctgtcatgcagcagttgcagcagcagcag
cagcagatgcaattgccacttcctccgtatcacagggaacccgatccaaagactatgcat
gaaccacaccagtactctcaggatcccagtcatcctgtgcagcttatccagttgggagca
gtgcctcagtattgcttccaagatccccacgaacagtacaggcacttgtacccccagagt
ctgctgcagcagcaagatcagcagaagcaatacctgagtgagagcagagtgccatccctg
aactctcacattggcctcactccaccagagaccgccgacgaccccgcacggcaggagatc
aattctgttggtaatgctgcccctcaccgaactcttttgccgccctcgggagttcatctg
aacaacaaaagctctcagcaagactctcctagcaccacgtggtctcagccggtgcaactg
tcagatggcagactgcagccactgtccccagaacaaagtggccaaaacagagaaacactt
cctgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttgaaggaatttaag
agtttgcctgctctaaatggtcacatgaggtcacacggaggagtaagagcatctcctaac
ttcaaacaggatgaaggagagaaaccaccacagcagccgctgcctaaagaggtggatggc
ctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtcacctgagcccagc
acgcagccctctgccagcactgccacagtcacagacaagcctgccaactctgtgtcagat
gatgagatgcccgttctcgtgaagatgacttactctccaccgtgcagtccaaaagtggcc
aacccctgctcatcctctgaaactagcaaaaaacctcatccaagtgctgtaaaattggaa
gaaaacttcaaaccattgcaggacaagaagaagtatcggcacagacccgaacctctcttc
atacctcctccttcattcaacctcagcatgtcccactccggtgccactctgtaccagagt
cagcttcgctctccccgtgttctgggcgatcacctgctggaccgaacgcacgagctgccc
ccctacactccgccacccatgctcagccccgtccggcaaggctctggtctcttcagcagt
gttctcacctcccacagcacatcacacactcagctgccacttactccactgacacccaca
ccacgggtgctcctgtgtcggtctaatagtattgatggaagtgtcattccagtgacgcct
gggcctggagaacagactgttgaaccgcgaatcaatattgggtccaggttccaggctgac
attcctgagctgcaggacagattgctaatggagaaagatgtgcacaaggctactttggtt
tggaaaccatggccagaactggagaacaaagtcttccaacaaagagtggaagacctttta
aatatgagctgttccagtgtgttacctggtggaggaactaactcagaatacgctttgcac
tctctctttgaagcaaaaggagatattatggttgctcttgaaaagctgctgttgagaaag
ccagtgagactgaagtgtcatcctttggcaaattaccactatgctggctctgacaaatgg
acacatcaagaaaggagactgttcaaagaggcattgtccacctacagcaaagatttcata
tttgtacagaaaatggttaagtctaagacagttgcacaatgtgtggaatactactacacc
tggaagaaaatcttgcgtttgggacggaaacacagaacgcgtttagagaagaaaagagat
gaatgcttgacaagtggagaagaggaagtattagaagaagatgaggagatcgaagatgac
agaaaggaagaaagggaaatgcagaaatcacctgacccaccagcaatctctcttgttgga
cccatagatctacctgctgttcagggtctttcactgtcttcatcctccttcatctgtgaa
atgccaaactgtggcgctgtgttcagttcccgacaagccctgaacggccacgctcgcatt
cacggaggtacgaaccaggtgacgaaaacgcgctgccccatggccggcaccaagcagaaa
tctggtacgcagagcggatactgctccatcaagagctcacctgcccacagcacaacgagc
ggcgagactgacccaacgaccattttcccttgcaaggagtgtggcagggtcttcttcaaa
atcaaaagccgcaatgctcatatgaagactcacagacagcaagaagaacagcaaaggcag
aaggctcagaaagctgctgtggcagcagaaatggcagccactattgcaagaactactggg
ccagctgggcatagtttgattcccctggatcacatgagtttggttaaacatgttgaaaat
gttggtgacattgatgatgatgttgttccggatctgggtgatgttatggaagagaatgaa
gtcatggatgctgaccttctactggatgatgaagatccagatctactgcaggatgatgct
gagttgtaa
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integrated database retrieval system
