Sylvia atricapilla (blackcap): 136359702
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Entry
136359702 CDS
T10263
Symbol
PAPOLG
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136359702 (PAPOLG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136359702 (PAPOLG)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
136359702 (PAPOLG)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
136359702 (PAPOLG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
LNP1
Polbeta
Motif
Other DBs
NCBI-GeneID:
136359702
NCBI-ProteinID:
XP_066172669
LinkDB
All DBs
Position
3:complement(109237979..109255713)
Genome browser
AA seq
745 aa
AA seq
DB search
MKETRGTSRQQNQPQGHYGLTSPISLAPPSDKDHIHTQKLIEAMKPFGVFEDQEELYHRT
TVLGKLNNFVREWISELAESKNLPPSITEQVGGKIFTFGSYRLGVHTKGSDIDALCVAPS
HVERSDFFQSFFEKLKNQEEVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSDDL
DLRDDSCLKSLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMG
FLGGVSWAMLVARICQLYPNALASTLVNKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDP
RVNPSDRYHVMPIITPAYPQQNSTYNVSVSTRAVMIEEFQRGLEVTDEILKGKSDWSKLF
EPLNFFQKYKHYIVLTASAFTEEHHLNWIGLVESKIRVLVGNLERNEFITIAHVQPQSFP
GNEVLYKQSGYVSMWFLGLVFKKAESAVKTNVDLTHGIQSFTDTVYRQASALNILKEGMK
IEATYVKRKQLHYFLPAGTLQKRKKQRVSDISQNNSGLQCKRSSLGEGCSDGSKDRDSRT
PSNSSSLNKISKLDISTAETERHVECQSCSGANSVSEPSTSKGLCIPVTDPKMEATVALR
TSGLPIGCTIPGYNTVCQLRTCFVQGQHKLSGTLITDPKSASPKQHYSPTSKVSRPPTAG
ECPQKAIDGEKLNVWDSDFTESEYPQDGRKRTTKNGVLDRKSTQIPVITSRAQRLPSKEL
PDSSSPVPTNSIRIIKRSIKLTLNG
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagacgcgcggtacttccaggcagcagaaccagcctcaaggacactatggactt
acctctccaattagcttggctcctcctagtgataaagaccacattcatactcagaagctg
attgaagcaatgaagccatttggggtgtttgaggatcaggaagaactctatcacaggaca
actgttcttggtaaactgaataactttgtcagagagtggatttcagaacttgctgaaagc
aagaatcttcccccttcaataacagaacaagtcggtggcaaaatatttacgtttggctcc
tacagacttggcgtgcacaccaaaggctcggacatagatgccctctgtgttgctcccagt
catgtggaaagatcagatttttttcagtcattctttgaaaaactgaagaatcaagaggaa
gtaaaaaacctgagagccattgaggatgcctatgtaccagttatcaaatttgaatttgat
ggcatcgagattgacctcgtgtttgcaaagttgtctttgccaacggtttctgatgatctt
gatctcagggatgactcgtgcctcaaaagcctggatataagatgcatacggagcttaaat
ggcagcagggttacagatgaaatactgcgtctggtgcccaatctggagaacttccggctc
acgctgcgggcagttaaactgtgggcaaaacgacgtggtgtttactccaacatcatggga
tttcttggtggagtctcctgggcaatgctggtagcaagaatatgtcaactctacccgaat
gctttggcctctactcttgttaacaagttcttcttgatattttcgaaatgggattggcca
aagccggtattattgaaacgacttgaagagagctttcttaatttaccagtctgggaccct
agggtgaacccatcagaccggtaccatgtgatgcccatcatcaccccggcctatccacag
cagaactccacgtacaacgtgtctgtgtcgacacgagcagtcatgatagaggagttccaa
cgtggtcttgaagttacagatgagattctcaaaggaaaatcagactggtcaaagctcttt
gaacctctgaacttctttcagaagtacaaacattacatcgtgctgactgccagtgccttt
acagaagagcatcacttaaactggattggcctcgtcgagtctaaaatccgtgtgctggtt
ggaaacttggaaaggaatgaatttataactattgcacatgtgcagccacagtctttccct
ggcaatgaagttctctataaacagagtggatacgtatcaatgtggtttcttgggcttgta
tttaagaaagcagaaagtgcagtaaagactaatgttgatctaacacatgggatacagtca
ttcacagatacagtttacaggcaagccagtgctctcaacatcctaaaagaaggtatgaag
atagaggcaacttatgtgaagagaaagcaactccattattttttgccagcaggaacctta
cagaaaagaaagaagcaaagggtgtcagatattagtcaaaataatagtggacttcagtgc
aaaaggtcttctttaggtgaaggctgttcggatggttccaaagacagagattccagaaca
ccctctaattcctcttcgttaaataagatttctaagttggacatctctacagcagagaca
gaaagacatgttgaatgtcagagttgtagtggtgccaacagtgtatctgagccatcaacg
tctaagggactttgcattcctgtgactgatccaaaaatggaggctacagttgcactaaga
acatcgggacttccaattggttgcaccattccaggatataacacagtttgtcaactcaga
acgtgttttgtgcaaggacaacataaattaagtgggactctaatcacggatcctaagagt
gcttcacctaagcagcattattcaccaacctctaaagtatctcgtccacctacagcagga
gaatgcccccaaaaagccatagatggagaaaagctaaatgtgtgggactccgatttcaca
gaaagcgaataccctcaagatgggaggaagagaactacaaaaaatggtgtccttgataga
aaatccacgcagattccggtgatcacatcaagagcacagaggcttcccagtaaagaactg
ccagattcttcatctcctgttccaacaaatagcattcgtatcattaaaagatccatcaaa
cttacccttaatgggtaa
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