Sylvia atricapilla (blackcap): 136359711
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Entry
136359711 CDS
T10263
Name
(RefSeq) macrophage mannose receptor 1-like
KO
K06560
mannose receptor, C type
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136359711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136359711
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sati04054
]
136359711
04090 CD molecules [BR:
sati04090
]
136359711
04091 Lectins [BR:
sati04091
]
136359711
Membrane trafficking [BR:
sati04131
]
Endocytosis
Phagocytosis
C-lectin receptors
136359711
Pattern recognition receptors [BR:
sati04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
136359711
CD molecules [BR:
sati04090
]
Proteins
136359711
Lectins [BR:
sati04091
]
C-Type lectins
Others
136359711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
CysR_MRC2_N
fn2
UL45
Ricin_B_lectin
Xlink
Chordopox_A33R
DUF6669
Motif
Other DBs
NCBI-GeneID:
136359711
NCBI-ProteinID:
XP_066172691
LinkDB
All DBs
Position
1:complement(20248613..20302937)
Genome browser
AA seq
1462 aa
AA seq
DB search
MAPSLLLLLLGLLPRALPRLDTSIFLIYNEDHKRCVLAQSSNSVTTAPCVQENESQKFRW
VSDHQLMSVAFKLCLGVPSKKDWVPVTLYPCDKASGLQRWECRNETLFAIQGEDLFFNYG
NKQERNIMLYKGSGLWSRWKVYGTTDDLCSRGYEDTYTVKGNDNGAPCVFPFKFGGKWYA
DCTDAGRSDGWFWCGTTSDYDVDKKYGFCPTKFTSNDLWNTDPLTNVQYQINSDTALKWH
QARKSCQQQKAELLSITELHEQTYLTGLTRTLSSALWFGLNSLNFNSGWQWVGGAPFRYL
NWVPGHPSPEPGKICGALNPGKGAKWENWECDKKLGYICKRGNATLESFIIPRETNVPIK
CPDQWMSYAGHCYIIHRDPKIWKDALTSCRKEDGDLASIHNVEEYSFIISQLGYQPSDEL
WIGLNDLKVQMYFEWSDGTPVTYTKWLRGEPTHANNRQEDCVIMKGKDGFWADHSCEKKT
GYICKRKPMSDAPTEEETIDMGCQRGWKRHGFYCYFIGNTFVTFSQANQTCGRHQAFLTT
VEDRYEQAYLTSLVGLRTERYFWIGLSDVEEKGMFKWANGESVLFTHWNSEMPGRKPGCV
AMRTGIAGGLWDVIKCEEKAKFICKVWAEGVTLPPVPTTTPIPRCPEGWDSSNRISFCFK
PFSRAEHKKTWLESQQFCRSIGGDLASINGKEEQFVIWRSITSHGYYYQNFWMGLYYLNP
DDGFAWSDGSPVRYENWGFGEPNNYQGIELCTEISGDSSMFWNDRHCDYMYGWICQIRKG
ASVKPEPTESPVPEYRTTEDGWIIHEDKQYYFSTENAPMEEGREFCKKNFGDLSVIESES
ERKFLWRYMLKHGKGDAYFIGLQLSVDQRTSWMDGTPVNYLAWAPHEPNFANNDENCVVM
YKNLGFWNDINCGYPNPYICERHNSSIDSTVPPATFSTPRGCRPTWLSFRNKCYKIFGST
EEERVTWHAARTACMNLGGNLASIPNEQVQAFLTFHLKDSAAETWIGLNDINHEMRFLWT
DGAGVYFTNWAKGFPSGHTDSYAYSGQADCVAMKNKPVKEAGKWADQSCDNSRGYICQIN
ADAEFLSSTTSSPSGVIHYGNSSYLFIHTKMTWEDARKNCKQNQFDLSSVLDPYSQSFLW
LKILKYGVPVWIGLNSNVTNGRYEWIDNWRMKYTKWAEGEPKQKIGCVYLDITGVWKTGF
CNETYFSVCKKSDVQAPSEPPQLPGNCPESEGHRSWIPFRGHCYYIESSSSRNWAQASLE
CLRLGASLVSVEDSAEASFLTYNLEPLEGKTSTFWTGMYRNVDGQWLWLDGSAVNFVNWN
VGEPSPQQNEHCVEMYADSGYWNNFYCSSYKGYICKKLKIPATEMPSASEMPPAEIPTMA
MTKDEKASTLNHSKTGVIVIVGVIILIGSGLGGYLFYKRRKNCLPTNDSFENNLYFNGDA
VPGISDTKDLVANIEQNEHATL
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggctccctccctgctgctgctgctcctcgggcttctcccccgggctcttccaaggctg
gatactagcatcttcttaatatataatgaagatcacaagcgctgtgtactggctcaaagt
tctaattcagtgactactgctccttgtgttcaagaaaatgagtctcaaaaattcaggtgg
gtctcagatcaccagcttatgagcgtagcattcaaattgtgcttgggagtgccttcgaag
aaagactgggttccagtcactctgtatccttgtgacaaggctagtggacttcaacgatgg
gaatgcagaaatgagactctctttgcaatccaaggggaagatttgtttttcaactatgga
aacaaacaggaaaggaatattatgctgtacaagggatctggtttatggagtaggtggaaa
gtctacggaaccacagacgatctgtgttctcgaggctatgaagatacctacacagtgaaa
ggaaatgacaatggagccccttgtgtatttccttttaagtttggtggtaaatggtatgct
gactgcacagatgctggcagatcagatggctggttctggtgtggaaccacttcggactat
gatgttgataagaagtatggattttgcccaacaaaatttactagtaatgatttgtggaac
acagatcctttaacaaatgtccagtaccagataaactctgacacagctctgaaatggcat
caggcaagaaaaagctgtcagcagcagaaggcagagttattaagcattacagagctacat
gaacaaacatacctgacaggtctgactcgcacactgagttcagctctctggtttggtctt
aacagtttgaatttcaacagtggatggcagtgggttggtggtgctccttttcggtactta
aactgggttccaggccatccttctccagaacctggaaaaatttgtggtgcattgaatcct
ggcaaaggtgctaagtgggagaactgggaatgtgataagaaacttggctatatttgtaaa
cgaggaaatgctactttagaatctttcattattcctagagagactaatgtgcctattaag
tgtcctgatcaatggatgtcatatgctggtcactgttacataattcatagggaccccaaa
atatggaaagatgccttaacatcttgcaggaaagaggatggagacctggcaagcatccat
aatgttgaagaatacagctttattatttctcaacttgggtaccagccatctgatgagctg
tggattgggttgaatgacctcaaagttcagatgtattttgaatggagcgatggaactcct
gtcacctacaccaagtggcttcgtggagaacccactcatgcaaacaacaggcaagaggac
tgtgtcattatgaagggaaaggatggattttgggcagaccattcttgtgaaaagaaaact
ggctacatctgtaaaaggaaacctatgtcagacgctcctacagaagaggaaactattgac
atgggctgccagagaggctggaaaagacatggtttttattgttacttcattggaaataca
tttgtaacattttctcaggcaaatcaaacatgtggaaggcatcaggcatttttaacaact
gttgaagacagatatgagcaagcctatcttaccagcctggttgggctgagaacagaaaga
tacttttggattggactttcagacgtagaagaaaagggaatgttcaagtgggctaatggt
gaatctgtcttatttacacactggaattctgaaatgcctggaagaaagccaggctgtgtt
gccatgaggactggaatagcaggtggattatgggatgtaataaaatgtgaagagaaggca
aagttcatatgcaaagtgtgggcagaaggagtgacacttccacctgttcccacaacaact
cctattccccggtgtccagaaggctgggactcaagcaatcgtattagcttctgtttcaaa
cccttttcaagagcagagcacaagaagacgtggctggagtcgcagcagttttgccggtcc
ataggaggggacctggcctccattaacggcaaggaggagcagtttgtgatttggcgttcc
atcacaagccatggctattactaccagaatttctggatgggtttatattacttgaatcct
gatgatggctttgcttggagtgatggatctccagtgaggtatgaaaactggggctttgga
gaaccaaataattatcaaggaattgaactttgtacagagatcagtggtgattccagcatg
ttttggaatgacaggcactgtgattacatgtatggatggatttgccagataagaaaaggg
gcaagtgtgaagcctgaaccaacagaatctcctgtgcccgaatacaggactactgaggat
gggtggattatacatgaagacaagcagtactatttcagcacagagaatgctcctatggaa
gagggtcgggaattctgcaaaaagaactttggagacctttctgtcattgagagtgaaagt
gaaagaaagttcctctggcgatatatgctgaaacatggcaaaggggatgcatatttcatt
ggtttacaactgagtgttgaccagcgtacaagctggatggatggcactccagtgaattat
ttggcatgggcaccacatgaaccgaactttgcaaataatgatgaaaactgtgtagttatg
tataagaatttaggcttttggaatgatataaactgtggctatccaaatccctacatatgt
gaaaggcacaacagttccattgattcaactgttcctccagcaacattttcaactccaaga
ggatgtcgtccaacttggctttcttttcgtaataagtgttacaaaatatttgggtctaca
gaagaggaacgtgttacttggcatgctgcacgaacagcttgcatgaatttaggaggaaac
ctggcctcgatccctaatgaacaagtgcaagctttccttaccttccatttaaaagattct
gccgctgagacatggattggattaaatgatataaatcatgaaatgaggttcctctggaca
gatggagcaggggtttactttacaaactgggccaaaggcttcccatcgggacatacggat
tcatatgcttatagtggccaggctgattgtgttgccatgaaaaacaaacctgttaaggaa
gcagggaagtgggctgatcagagctgtgataacagcagaggatatatatgccaaattaat
gcagatgctgaatttctgtcttctacaacttcatccccatccggtgttatccattatggg
aatagtagttacttgttcatccataccaaaatgacatgggaggatgcacggaaaaactgc
aaacaaaatcagtttgacctttccagtgtcttagacccctacagtcagtcattcctgtgg
ctgaagatattaaagtatggggtgcctgtgtggattggtcttaacagtaatgtgaccaat
ggacgttatgaatggattgataactggagaatgaagtacacgaaatgggctgaaggggag
ccaaagcaaaaaataggctgtgtctatcttgacattactggagtctggaagacaggattc
tgcaatgaaacttacttctctgtttgcaaaaagtctgatgttcaagctcccagtgagccc
cctcagcttccaggaaactgtcctgaatcagaaggacacaggtcttggatccctttccga
ggtcactgctactacattgaatcttcgtcttcaagaaactgggcccaggcatctttagaa
tgtcttcgactaggtgcctctttggtctcagttgaagactcagctgaagccagctttctg
acctacaaccttgaaccacttgaaggcaaaacatcaacattttggacaggaatgtataga
aatgtggatggacagtggttgtggctagatggctctgcagtgaattttgtcaactggaat
gtaggagaaccttctcctcaacaaaatgagcactgtgttgaaatgtatgcagactctggg
tattggaataatttctattgctcttcctacaaaggatatatttgtaaaaagctgaaaatt
ccagcaactgaaatgccatcagcatctgaaatgccaccagctgaaatacctacaatggca
atgacaaaagatgagaaggcttctaccctaaaccacagcaaaacaggagttatagttatt
gttggtgtcatcatcctcattggaagtggccttggaggatatctcttctacaaaagaaga
aagaattgcttgccaacgaatgacagctttgagaataatttgtattttaatggtgatgca
gttcctggaattagtgacacaaaggatcttgtggccaacatagagcagaatgaacatgca
acactgtaa
DBGET
integrated database retrieval system
