Sylvia atricapilla (blackcap): 136359712
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Entry
136359712 CDS
T10263
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136359712 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136359712 (PNPT1)
03016 Transfer RNA biogenesis [BR:
sati03016
]
136359712 (PNPT1)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
136359712 (PNPT1)
Messenger RNA biogenesis [BR:
sati03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
136359712 (PNPT1)
Transfer RNA biogenesis [BR:
sati03016
]
Prokaryotic type
tRNA degradation factors
136359712 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OAF_N
Motif
Other DBs
NCBI-GeneID:
136359712
NCBI-ProteinID:
XP_066172688
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Position
3:110914955..110931207
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AA seq
789 aa
AA seq
DB search
MAAATSCGRAALGALSRDGRGAAAQWRRVLTPGRATLPWVSARGAAAGPGRAVTVEVGGR
KMELSSGKLAKFADGSAVVQLGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPT
NYLRRELGSTDKEILTSRVIDRSIRPLFPAGYFYDTQILCNLLAVDGVNDPDILAINGAS
AALALSDIPWNGPIGAVRVGLVDGETVINPTRKEMASSALNLVVAGAPQSQVVMLEATAE
NILQQDFCHAIKVGLKQTQQIIQGIQQLVRERGMVKRTVQKLFIAPEEIVEVAKKLASNK
IYAVFTDSNHDKISRDEAINKIRLETEEQLKEKFPEAEPYEIMESFNVVSKDIFRSLVLN
EYRRCDGRDLTSLRDVKCEVNMFKMLHGSALFQRGQTQVLCTVTFDSLESSVKSDVISTA
VSGIKDKNFMLHYEFPPYATNEIGKVTGMNRRELGHGALAERALKPVIPQDFPFTIRVTS
EVLESNGSSSMASACGGSLALMDAGVPVSNAVAGVAIGLVTKCSEGKGGIEDYRLLTDIL
GIEDYYGDMDFKMAGTSKGITALQVDLKLPGIPIKIVVEAIQQATAAKREILQIMNQTLA
KPRPNRKESGPVVETIHVPLSKRLRFVGPGAYNLKKLQAQTGVTVSQLDEETYSVFAPTP
GAMHEAREFIGEICKDDQEVNLEFGAIYTATITEIRDSGVMVKLYPNMTPVLLHNSQLDQ
RKVKHPSALGLEVGQEIQVKYFGRDPTDGRMRLSRKILQSPASSTLKTLTDKNSIVLGGA
VPQTSTSSQ
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccacgagctgcgggcgggccgcgctgggagccctgtcccgggatgggcgc
ggggccgcggcgcagtggcggcgggtcctgaccccgggccgtgccaccctgccctgggtg
tccgcccgcggcgccgcggcggggcccgggcgggccgtgacggtggaggtgggcggcaga
aagatggagctgtcttctggaaaacttgcgaagtttgctgatggatctgctgttgttcag
ctaggtgacacagctgtgatggtcacagcagtcagcaaaaccaagccctctccatcacag
tttatgccactagtggttgactaccggcagaaagctgctgcagcgggaagaattcctaca
aactatctaagaagagagcttggttccactgataaagaaattcttacaagcagagtaata
gatcggtcgatcagaccactcttcccagcaggctacttttatgatacacagatcctttgt
aatcttttagcagtagatggtgtcaatgatcctgatattctggcaattaacggagcttct
gctgcacttgccttatctgatatcccctggaatggtcctattggtgcagtgagggtaggg
ctggtggatggagagactgtgatcaatccaactcgaaaagagatggcctctagtgctcta
aatttagttgttgctggagctccacaaagtcaagttgttatgctggaagcaactgctgag
aacatcttgcagcaagacttctgccatgccatcaaagtggggttgaagcagacccagcag
atcatccagggcattcagcagctggtgagggagcggggcatggtcaagagaactgtccag
aaattgttcattgctcctgaagagattgtggaagtcgcaaagaaactcgcctctaacaag
atctatgcagtgttcacagattcaaaccatgataaaatttcaagagacgaggcaatcaac
aaaataaggctcgaaacagaagaacagctgaaagaaaaatttccggaggctgagccttac
gaaatcatggaatctttcaatgtggtttcaaaggatatttttagaagtcttgtgctaaat
gaatatagaaggtgtgatgggagagatttgacttccctcagagacgtcaaatgtgaagtg
aacatgttcaaaatgctgcatggatcagccttatttcaaagaggtcaaacacaggttctg
tgtacagttacatttgactctctggaatcgagtgtaaaatcagatgttatctccacagca
gtgagtggaataaaagataaaaacttcatgctgcattatgagtttccaccttacgcaacc
aatgagattggcaaagttactgggatgaacagaagagagcttggacatggtgcactggca
gaacgagctttgaaaccagttataccccaggatttcccattcacaatccgagtgacttct
gaagtcttagaatcaaacgggtcctcctcaatggcttctgcgtgcggtggaagtttggca
ctaatggatgcaggagttccagtgtcaaatgcagtggcaggtgtagccatagggcttgtt
accaagtgcagtgagggaaaagggggtatcgaggactatcgcttgctgacagacatcctg
ggaattgaagattactatggagatatggatttcaagatggcaggcaccagtaaagggata
acagcactgcaggttgatctcaagctgccaggaataccaataaaaatagtggtggaagct
attcagcaagccacagctgcaaagagggagattttacaaattatgaaccaaacactggca
aaacccagacctaacagaaaagaaagtggaccagttgtagaaactatccatgttccatta
tcaaaaagattaagattcgttggtcctggggcttataatctgaaaaaacttcaagcacag
actggtgtgactgtaagccagctggatgaagagacatattctgtgtttgcccccacgccg
ggggcaatgcacgaagccagggaattcattggggaaatctgcaaagatgatcaagaagtt
aatttggaatttggggcaatttatacagccacaattactgaaataagagattctggagtg
atggtaaaactgtacccaaacatgaccccagtattacttcataattcacagctggatcaa
agaaaggttaaacaccctagtgccctgggattagaagttggacaagaaattcaggttaaa
tactttggccgtgatcccactgatggcagaatgaggctttcacgtaaaattctgcagtcc
ccagcctctagcaccctgaaaaccctgacagacaaaaacagcattgtcctgggaggggct
gttcctcagacatccacctcatcccagtga
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