Sylvia atricapilla (blackcap): 136359728
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Entry
136359728 CDS
T10263
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sati03037
]
136359728 (NPHP1)
Cilium and associated proteins [BR:
sati03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
136359728 (NPHP1)
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
SH3_10
Motif
Other DBs
NCBI-GeneID:
136359728
NCBI-ProteinID:
XP_066172724
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All DBs
Position
3:complement(111561556..111573201)
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AA seq
673 aa
AA seq
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MSERRARGPLQRVQRRSRELLAQVEALRAESAAAAPGQREALWLRCTQLKKLMEENTNAL
HALKKADEPAPVGNYSQRKEEEEKLLLKLSQQLQKLLLVLDQDNVTKNYPEDEEHQKGPC
TEEGNEEEESEYEESEEEDAEEEDEEKLLHNPNVRECVAVGNFDAQQEGDLTFVKGEILL
IHDKKADGWWVAENSKGERGLVPSTYLAVPKEEEESHEESKEHIEVVDETADGTEIKKRT
DSHWSAVRAITENDTVEVLSTTGAVPAGFRPSMLFQLLEEGEEFRASSYLQPELTPSQLT
FKDLVWNCERNTIHPRPTRVSLIVTLCSCKMIPFPGSGVRVLSRHVRLCLFDGSRVLSNI
HTVRATWLPKNPQTWTFSPRVMGILPSLLDGDSFVRSSSMSSDIGILFELGITYRCNLTG
DRGELSCGWAFLKLFTSSGIPIPSKMYELVLSGGTPYERGVEVDPSISRRAGSGVFQQFM
SLRKQPVLLVKVKSPSMYSKDILNFLPETLVGCMCYIHLLVFYRQILGDALLKDRMSMQS
TDLICNPVLATFPQLLDQPDLMDALRSAWADKERTLKRIEKRDQEFLKSAFVLVYHNSVF
PLLCSTFLPSYKWAEEEVELCRWKMIHDFLKRSRDNDGALEYLLSSGNTHRAFDISELAY
DFLGEVRENNPGP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcggcgggcgcgggggccgctgcagcgggtgcagcgccggagccgggagctg
ctggctcaggtggaggcgctgcgagcggagagtgcggccgcggcccccgggcagcgggag
gctctttggctgagatgtacacagctgaagaaattgatggaggagaatacaaatgctctc
catgctttgaaaaaagctgacgagcccgcgccggtggggaattacagccagaggaaggaa
gaggaagaaaagctgttgctaaaactctcccagcagctgcagaaactccttcttgtcttg
gatcaggataatgtgacaaagaattatccagaggatgaggaacaccagaaaggtccttgt
acagaagagggaaatgaagaggaagagagtgaatatgaagaaagtgaggaggaagacgct
gaagaagaagatgaggagaagttgttgcataatccaaatgttagagaatgtgttgctgtt
ggaaactttgatgcccagcaggaaggggatctcacatttgtgaaaggtgaaatcctgctc
atacatgacaagaaggcagatggctggtgggtagctgaaaattccaagggggagagaggc
ctcgttcccagcacttaccttgcggttcctaaggaagaggaagaaagccatgaggagtca
aaagagcacatagaagtggtggatgaaacagcagatggaactgaaattaaaaaaagaaca
gattcccactggagtgctgttcgagccatcacagagaatgacactgtggaggtactgagc
accacaggggcagttcctgcaggattccgtccatccatgcttttccagctcttggaggaa
ggtgaagagtttcgagcaagctcctatttgcaacctgagcttactccatcccagctgact
ttcaaagacttggtgtggaactgtgagagaaatactatccatcctagacccaccagagtg
tccctgattgtcactttatgcagctgcaagatgatccctttccctggaagtggcgtgaga
gtcctcagccggcacgtccggctttgcctcttcgatggcagccgggtgctgagtaacatt
cacacagtgagagctacatggctgcctaaaaatcctcaaacttggaccttttctccaagg
gtgatgggcatcttacccagcttgcttgatggtgactctttcgtcaggtccagctccatg
tcttcagacattgggatactgtttgagcttggcatcacgtacaggtgcaatttaacaggt
gacagaggagagctgagctgtggctgggcctttctgaagcttttcacttccagtgggatt
cctattccttccaagatgtatgagctggtcttgagtggtgggactccctatgagagaggc
gttgaagttgacccatcaatatcaaggagagcaggctctggggtttttcagcagtttatg
agcctcaggaaacagcctgtgcttctggtgaaagtgaagtcaccgagtatgtactcaaaa
gatatcctgaattttctccctgaaacattagttgggtgcatgtgctacatccatctcctg
gtgttttatcggcaaatccttggagatgccctcctgaaggacagaatgagcatgcaaagc
acagacttaatctgtaatcccgttctagcaactttccctcaactcctggatcagccagac
ctgatggatgcacttcggagtgcctgggcagacaaagaaagaacattgaagcgaattgag
aagagagatcaagaattcctgaaatctgcatttgtcctggtgtaccacaactctgtgttc
cctctgctgtgctccacattcctccccagctacaaatgggctgaggaagaggtggaattg
tgtcgctggaaaatgatccatgacttcctgaaaaggagccgggataatgacggtgcactg
gagtacctgctgtcatcaggaaacacccacagagcctttgacatctcagagctggcctat
gatttcttaggagaagtgagggaaaacaatcctggaccatga
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