Sylvia atricapilla (blackcap): 136359864
Help
Entry
136359864 CDS
T10263
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136359864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136359864
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
136359864
Prokaryotic type
Archaeal type
TFE
136359864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE-A_C
TFIIE_alpha
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_PaaD
DUF8255
Motif
Other DBs
NCBI-GeneID:
136359864
NCBI-ProteinID:
XP_066172866
LinkDB
All DBs
Position
4:2912105..2916182
Genome browser
AA seq
427 aa
AA seq
DB search
MEQQSVPSEVPAALKRLAKSIVRGFYGVECSLALDVLIHYPCVKEDDLLQLLKYERKQLR
AVLNTLRADKLVKLQMRVETGPNGKSTKNNYYYINYKVLVDVVKYKLDQVRRKIEADERD
SATRASFKCPSCSSTYTDLEVNQLFDAFTETFHCTYCNTEVEEDGSAFPKRDARTLLAKF
NEQIEPVFVLLRETEEIVLPYDLLEPQPTEIPELSESFDPKLGSSVLESCSHPEKWAHRS
SASGLTYTQNLTIDVQDSKHKKKTREKATKKQPIWLSQSTVEGTATLTNNSIGVNATEEN
VEETEENVEETVTDNEIIKTLLIHESKSLSYPDQAPIVKSKLHGSCSDNSEFEEDAKHLK
GAGMKAAGSNFEEEEEQETLGPVLMVAGQPYSYGEVSENPELVSLMTEEEKEAYIKVGQE
MFQSVFD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaaagcgttcccagcgaggttccagcagccctaaaacgcctggccaagtcc
atagtgcgtggtttttacggcgtggagtgttccctggccctggatgtgctgatccactac
ccctgtgtcaaagaggatgacttgttacagctgctcaagtacgagcggaagcaactgcgc
gccgtcctcaacacactgcgggcagacaagctggtgaagctgcagatgagagtggaaacg
gggccaaacgggaagagcaccaagaacaattattattacatcaattacaaggtgctggtg
gacgtggtaaagtacaaactggatcaggtgcgccggaaaatagaagcggatgagcgggat
tcagccaccagagcctcctttaaatgtccatcttgctctagcacctacaccgacctggaa
gtcaaccagctctttgatgcatttacagagactttccactgcacttactgcaacactgaa
gtagaggaagatggctcagctttccccaagcgcgacgctcggaccttgctggccaaattc
aacgagcagatcgagccagtctttgtgctgctgcgtgagactgaggagattgtgctgccc
tacgacctgctcgagcctcagccaacagaaataccagagttatcagaaagctttgatccg
aagttgggctcaagtgtgctggaatcctgcagccaccctgaaaaatgggcacacagaagt
tctgcttctggccttacttacacccaaaacttaaccattgatgtccaagactcaaagcac
aagaagaaaacaagagaaaaagcaaccaaaaagcaacctatctggttgtcacagagcact
gtggaaggaacagcaacactcaccaacaacagcattggagtaaatgctactgaagaaaat
gttgaggaaactgaagaaaatgtcgaagaaactgtcactgataatgaaatcatcaagact
cttctgatccatgaatccaagtcactgtcttacccagaccaggctcctattgtcaaaagc
aaactccatggatcatgcagtgataacagtgagtttgaagaggatgccaagcacttaaaa
ggagcaggaatgaaagcagcaggcagcaactttgaagaagaggaggaacaggaaacactg
ggtcctgttttaatggtagctggccaaccctattcatatggtgaagttagtgaaaaccca
gagcttgtgtctctcatgacagaggaggagaaagaagcttatataaaagtaggacaagaa
atgttccagtctgtctttgactaa
DBGET
integrated database retrieval system
