Sylvia atricapilla (blackcap): 136359939
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Entry
136359939 CDS
T10263
Symbol
ABCB1
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136359939 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136359939 (ABCB1)
04147 Exosome [BR:
sati04147
]
136359939 (ABCB1)
04090 CD molecules [BR:
sati04090
]
136359939 (ABCB1)
Enzymes [BR:
sati01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
136359939 (ABCB1)
Transporters [BR:
sati02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
136359939 (ABCB1)
Exosome [BR:
sati04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136359939 (ABCB1)
CD molecules [BR:
sati04090
]
Proteins
136359939 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_28
AAA_29
G-alpha
AAA_15
AAA_30
AAA_14
AAA_19
nSTAND1
DUF815
DUF2057
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
136359939
NCBI-ProteinID:
XP_066172927
LinkDB
All DBs
Position
1:complement(21418654..21453927)
Genome browser
AA seq
1297 aa
AA seq
DB search
MHSGDEKRYTADGNSYEIVASSQGNESEDKHKAKKKQKKGEKPKMVSPFTLFRYSSWSDK
LLMILGTLLAVAHGSSLPFAMIIFGDMTDSFVASGNTGSTGNNSMNFTEDMKNISMNFTA
EMLHKLEEDMTRYAYYYSGIAAGVLVAAYIQTSFWTLAAGRQIKKIREKFFHAIMRQEIG
WFDVNDVGELNTRLLDDVAKINEGIGDKIGLLVQSITTFVAGFVVGLIRGWKLTLVILAV
SPVLGLSAALWAKVLSAFTDKEQAAYAKAGAVAEEVLAAIRTVIAFGGQEKEIKRYHKNL
EEAKRIGIKKSITANISMGAAFLLIYASYALAFWYGTTLILADDYTIGKVLTVFFSVLIG
AFSIGQTAPSIEAFASARGAAYTIFNIIDNEPQIDSYSETGHKPDHIKGNLEFKNVYFNY
PSRPDVEILKGLNLKINSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGMVTIDGQDIRTL
NVRYLREVIGVVNQEPVLFATTIAENIRYGREDVTMEDIEKATKDANAYDFIMKLPNKFE
TVVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESESIVQAALDTAREGRT
TVVVAHRLSTVRNADQIVVFEGGVIAEQGNHAQLLERKGIYHKLVNMQSIEAEVPSSGNY
ENVRSVKNSESELEFEESLTKGLRRRSTRRSMKKPGEQNDNPDEEKTSPAEELPPASFLK
IMKLNKXEWPYFVAGTLCAIINGALQPAFAIIFSKIIGIFSETDKDYLRKQSNLYSLLFL
VLGIISFLLSFFRYGFAFGKAGEILTMRLRFMAFKAMLRQDMGWFDNPXNSTGALTTRLA
NDASQVKGATGVRLALIAQNVANLGTGIIISLVYGWQLTLLLLAVVPIIAVAGMIEMKML
AGHAKKDKRELETAGKIATEAIENIRTVVSLTRERKFESMYGEHLIVPYRNSVKKAHIFG
FCFALSQAMMFFTYAGCFRFGAYLVVNGHMVYQDVFLVFSAVVFGAMALGQASSFAPDYA
KAKISAAHLFLLFERVPSIDSYSEEGDKPETFEGNITIKDVAFNYPNRPEVKILQGLNLK
VEKGQTLALVGSSGCGKSTVVQLLERFYDPLDGEMLFDGKNAKALNIQWLRAQIGIVSQE
PILFDFTIAENIAYGDNSRQVSFEEIVTAAKEANIHSFIESLPDKYNTRVGDKGTQLSGG
QKQRIAIARALVRKPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTXQN
ADKIAVVQNGKVIEQGTHQQLLAEKGVYYSLVNVQNV
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgcattctggagatgaaaagaggtatactgcagatggaaatagttatgagatcgttgca
tccagccagggtaatgaatctgaagacaaacacaaggcaaagaagaagcagaagaaaggg
gaaaaacctaagatggtcagcccatttacactgtttcgatactccagctggtcagataaa
ttattaatgatactaggcactctgctggcggtagcccatggaagcagtctcccttttgcg
atgataattttcggtgatatgactgatagttttgttgcttctggaaacacaggttctaca
ggaaacaattcaatgaatttcactgaagatatgaaaaacatttcaatgaatttcactgca
gagatgcttcacaagctggaagaagatatgacaagatatgcatactactattctggaata
gcagctggtgtccttgttgctgcttatattcagacttcgttctggaccttagcagcaggt
cggcaaataaaaaaaattagagaaaaattttttcatgcaattatgagacaggaaattgga
tggtttgatgtaaatgatgtgggagaacttaacactcgtcttctagatgatgtcgccaag
attaatgaaggaataggtgacaagattggattgcttgttcaatcaataacaacatttgtg
gcagggtttgttgttggtctcataagaggatggaaattaaccctggtaatactagcagtt
agtcctgtcctgggactttcagcagccctctgggcaaaggttctctctgctttcactgac
aaagaacaagctgcatatgcaaaagcaggcgctgttgcagaagaagttctggcagcaatc
cgtactgtaatagcttttggaggacaggaaaaagaaattaaaagataccataaaaattta
gaagaggctaaacggattggaataaaaaagtctattacagctaatatttctatgggtgct
gctttcttactgatatatgcatcatatgcattggcattctggtatggaactactttgatc
ttagctgatgattacactattggcaaagttcttacagtctttttctctgtactgattgga
gctttcagtattggacagactgctccaagcatagaggcatttgccagtgcaagaggagct
gcctataccatctttaatataatagacaatgaacctcaaattgacagctattcagaaaca
ggtcacaagccagaccacataaaagggaacttggaattcaaaaatgtttacttcaattat
ccatccagaccagatgttgagatactgaagggcttgaatctcaagattaattctggccag
acagtggccctggttggcggcagtggctgtgggaaaagtacaactgttcagctcatccag
agattttatgatcccaaggaaggcatggttaccattgatgggcaggatattaggacctta
aatgtgaggtatctgcgggaggttattggtgtggtgaatcaggagcctgtgctctttgcc
actactattgcagaaaatattcgttatggccgcgaggatgtcaccatggaggacattgaa
aaagccaccaaggacgcaaatgcttatgacttcatcatgaagctacccaataagtttgaa
actgtggttggagaaagaggggcacagctcagtggaggacagaagcaaagaatagcaatt
gcccgagctctggttcgtaatcctaaaattcttctgcttgatgaggcaacatcagctttg
gatactgagagtgaatcaattgtgcaggcagcactggacacggcaagggaagggcgcacc
acggttgtcgtggctcatcgactatcaacggtccgaaacgcagatcagatagttgtgttc
gaaggtggagttattgcagaacaagggaatcatgctcaactgcttgagaggaagggaatc
taccacaaacttgttaacatgcagtcaatagaagctgaagttccatcatcaggcaattat
gagaatgtgcgtagtgtcaaaaacagtgaatctgaactagaatttgaagaatccttaact
aaaggattgagaagacgatcaactcggagaagcatgaaaaagccaggagagcaaaatgat
aatcctgatgaggaaaaaacttcacctgctgaagaactacctccagcttcatttctgaaa
atcatgaagttgaacaaanctgaatggccatactttgtagctggaaccttgtgtgcaatc
atcaatggagctttacaacctgcatttgcaatcatattttctaaaatcatagggattttt
agcgagactgacaaggactacttaagaaaacagagcaacttatattccctgctgttttta
gtgcttggaatcatttcctttttactttcttttttcaggtatggtttcgcatttggcaaa
gctggagaaattcttacaatgaggcttcgattcatggcttttaaagcaatgcttagacag
gatatgggctggtttgataatcctnaaaatagcactggagcgttaactacaagacttgct
aatgatgcctctcaagtgaaaggagcaactggtgtcagactagcattaattgcccaaaac
gtggccaacctggggactggaattattatatcattagtttatggctggcagctgaccctg
ctacttttagcagttgtgcccatcattgcagtggcaggaatgattgaaatgaagatgttg
gctggacatgctaagaaagataaacgagagctggaaactgcaggaaagattgccacagaa
gcaatagaaaatattagaactgttgttagcttgacccgagaaagaaaatttgagtcgatg
tatggagaacatctgattgtaccatacagaaattctgtgaagaaggcacatatatttggc
ttttgttttgccctttcacaagcaatgatgttctttacctatgctggctgtttccggttt
ggtgcctatctagtggtaaatggacacatggtctatcaagatgtatttttagtgttttca
gctgttgtatttggtgcaatggcactaggacaagccagttcttttgctccagactacgcc
aaagccaagatatcagcagcccacttgtttctgctgtttgaaagagtgccctcaatagac
agttacagtgaagaaggagacaagcctgaaacatttgagggaaacataacaatcaaagat
gtggcatttaactacccaaaccgaccagaggtcaaaattctccaaggtttgaatctaaaa
gtagaaaagggacaaactctggctcttgttggcagcagtggctgtggaaagagcaccgtt
gttcagctgctggagagattttatgacccacttgatggggaaatgctttttgatggcaaa
aatgcaaaggcacttaatatccagtggttgagagctcagattggtattgtctctcaagaa
ccaatcctgtttgacttcactattgctgaaaacattgcctatggagataacagtcggcag
gtgtcctttgaggaaattgttactgcagcaaaagaagccaatattcattccttcattgag
tcactgccagataaatacaatacccgtgtaggagacaaggggacacagctttctggtggc
cagaaacaacgtatcgctattgcccgagctcttgtgcgtaagccccaaattctgcttctg
gatgaagctacttctgccttagacacagaaagtgaaaagattgtccaggaagcactggat
aaagcccgagaaggtcgcacgtgcatcgtgatcgctcaccgcctctccaccnatcaaaat
gccgacaagatcgccgtggtccagaacggcaaggtcatagagcagggcacccatcagcag
ctgctggctgaaaagggtgtctactattcccttgtcaatgttcaaaatgtgtaa
DBGET
integrated database retrieval system
