Sylvia atricapilla (blackcap): 136359963
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Entry
136359963 CDS
T10263
Symbol
RRH
Name
(RefSeq) visual pigment-like receptor peropsin
KO
K04253
visual pigment-like receptor peropsin
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sati04030
]
136359963 (RRH)
G protein-coupled receptors [BR:
sati04030
]
Rhodopsin family
Vision
Opsin
136359963 (RRH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srt
FtsK_4TM
Motif
Other DBs
NCBI-GeneID:
136359963
NCBI-ProteinID:
XP_066172942
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Position
4:complement(47387471..47397407)
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AA seq
342 aa
AA seq
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MHWNDSSNSSESDNEAHSAFTQTEHNIVAAYLITAGVISIFSNIVVLGIFVKYKELRTAT
NAIIINLAFTDIGVSGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASIGLLTVVA
VDRYLTICRPDIGRRMTARSYAALILAAWINAVFWSSMPTAGWASYAPDPTGATCTVNWR
KNDASFISYTMSVIAVNFVVPLTVMFYCYYNVSRTMKQYASSNCLESINIDWSDQVDVTK
MSVVMIIMFLVAWSPYSIVCLWSSFGDPKKISPAMAIIAPLFAKSSTFYNPCIYVIANKK
FRRAILAMVRCQTRQEITINNALPMSVSQSALTSQNSSRLPA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcattggaatgactcatccaattcctcagaaagtgacaatgaagctcattcagccttc
acacagactgagcacaacatagttgcagcttacttaataacagcaggagtgataagcatt
ttcagtaacatcgttgtgttaggcatctttgttaagtacaaagagcttcggacagcaacc
aatgcaattattatcaacttggcttttactgatattggtgttagtggcattggttacccc
atgtctgctgcctcagacctgcatggaagctggaaatttggatacaccggatgccagatc
tatgctgccttaaatatctttttcgggatggcgagtattggtttgctgactgttgttgct
gttgatcgttacctgaccatctgcaggcctgatataggaagaagaatgaccgcccggagc
tatgccgctctcatcctcgctgcctggataaatgcagtcttctggtcctccatgcctact
gcaggctgggccagctatgctccggaccccactggagcaacgtgcacagtaaattggagg
aaaaatgatgcgtcctttatttcctacacaatgagtgtaattgctgttaattttgttgtg
cccttaacagtcatgttttactgttattacaatgtttcccggacaatgaaacaatatgcc
agcagtaactgcctggagagcattaacatagattggtctgaccaagtagatgtgacaaag
atgtctgttgtaatgattataatgttcttggtggcatggtctccatattctattgtgtgt
ttgtggtcttcctttggagacccaaagaaaatttctcctgcaatggccatcatagctcct
ctcttcgcaaaatcttccacattctataacccctgcatttatgtcattgcaaacaaaaag
tttcggagggcaatcctggcaatggtgcggtgtcagacgagacaggagataaccataaac
aatgccttgcccatgagtgtatctcaaagtgcactgacatcccagaactccagtcgtttg
cctgcataa
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