Sylvia atricapilla (blackcap): 136360061
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Entry
136360061 CDS
T10263
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04010
MAPK signaling pathway
sati04020
Calcium signaling pathway
sati04144
Endocytosis
sati04510
Focal adhesion
sati04540
Gap junction
sati04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136360061 (PDGFRA)
04020 Calcium signaling pathway
136360061 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136360061 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
136360061 (PDGFRA)
04540 Gap junction
136360061 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
136360061 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sati01001
]
136360061 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sati04090
]
136360061 (PDGFRA)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
136360061 (PDGFRA)
Protein kinases [BR:
sati01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
136360061 (PDGFRA)
CD molecules [BR:
sati04090
]
Proteins
136360061 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Gypsy
Ig_6
Kinase-like
Motif
Other DBs
NCBI-GeneID:
136360061
NCBI-ProteinID:
XP_066173086
LinkDB
All DBs
Position
4:complement(5820942..5853042)
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPWIFLLLGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGNHRIDIRHEENNSGFFVTVLEVGNASAAHTGLYVCYYNHTQVEDGDVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPAVIPCRTSDPEAQVTLVNSLDKSVYALYDAKQGFIG
NFPAGSYTCKTMVKGVEFKSDEFLIYIIRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFVHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALISAL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNMSDIHMEAHLDE
KNMVESQVTFQKVEETLVVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLNRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMSESEVKN
LLSDDTSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccatggatattcctactcctgggatgttttctcacaggaccattccta
acattttgccagcttcctctgccaactattgttcccaataggaatgagatggtggtacag
ctgaattccaatttcacactcaaatgctctggagacagcgaagtgagctggcagtaccca
gtgaccgagggaaaccacaggatagacatcagacacgaggaaaacaacagtggcttcttc
gtgacggtgctcgaagtaggaaacgcctcagctgctcatacaggcttgtatgtgtgctac
tataaccacacacaagtggaggatggggatgtggaagggaaggacatctacatctatgtg
cctgacccagacatgccttttgttccttccataccagaagaccagttcatcctagtagaa
gaaggtgatcctgcagttatcccgtgtcggacaagtgacccagaagctcaagtgacttta
gttaacagtttagacaagtctgtgtatgctttatatgatgccaaacaaggcttcataggg
aattttcctgcgggctcatacacgtgcaaaacaatggtgaaaggcgtggagttcaagtct
gatgagttcctcatctacattataagagctacttcacagctgcctgttgaaattgaagct
cttaaaactgtctacaaaacaggcgagaccatcgtagtaacttgtgtggtctttgacaac
gaggtggttaatttacagtggaattatcctgggaaagtgaaagaaaaaggtctgataaaa
cttgatgatatcaaagtcccatcgcagaagctggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgctcggcatgcaaccaaggaggtcaag
gaaaataagaaagtagtcattacagttcatgacaaaggctttgttcacctggagcctcag
tttagccctctggaagctgtcaacctgcatgaagtcaaaaactttgttgttgatgtgcag
gcttacccagcaccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
acggagattgttactagttccaacagggtccaggaaaccaggtttcagagtattttaaaa
ttgatacgggccaaggaggaagacagtggatactatactttggttgccgaaaacgaagat
gagattaaaagatacaccttctccttgctgatacaagttccagctctgatctcagccctc
gtggatgatcaccatggctctgcaggtgggcagacagtgagatgcctggcagaggggacc
ccacttcccgatgtggaatggctggtttgcaaggacattaaaaagtgcagcaatgacacc
tcatggacccttttgactaacaacatgtctgatatacacatggaagctcacctggatgag
aaaaatatggtggaaagccaggtgaccttccagaaggtagaggaaaccctggttgtgcga
tgtgtggcaaggaatgaccttggtgctgttactcgagagctgaagcttgtggctcccacc
ttgagatcagagctaacggtggctgctgctgtcttagtgctgttagtgattgtgataatt
tccctgattgtcctggtcatcatatggaaacagaagccaaggtatgagattcgatggaga
gtcattgagtctatcagccctgatggccatgagtacatttatgtcgacccaatgcaactg
ccttatgactccagatgggagtttcctcgagatgggttagtgcttggtcggatccttggt
tcgggagcatttggaaaagtagttgaagggactgcatatggattgagtcgctctcaacca
gtgatgaaagtagctgtgaaaatgctgaaacctacagccagatccagcgaaaagcaggca
ctcatgtctgaactgaagataatgacacatcttggtccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcattactgaatactgtttttatggt
gatttggtgaactacctgcataagaatagggacaatttcctgaaccgacacccagaaaag
cctaaaaaagatttggatatctttgggatgaaccctgctgatgaaagcacaagaagttat
gtgatactatcatttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgccaatgttggaaaggaaggaaggctctaaatactctgatattcagagatct
gtgtatgatcggcctgcttcatataagaagaaatccatgtcagaatcagaagtcaaaaac
cttctttcagatgatacttcagagggcctcagcctactggatttgctgagtttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgtgtgcaccgtgacttggct
gcccgtaatgtcctcctggctcaaggaaaaattgtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagtactttcctccccgtaaaa
tggatggcacctgaaagtatttttgacaacctgtacacaacattgagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccatatcctggcatgatg
gtcgattctactttctacaataagatcaagagtggataccgaatggccaaacctgatcat
gctaccaatgaagtgtatgagattatggtgaagtgctggaacagcgaaccggagaaaaga
ccttctttctaccacttgagtgaaattgtggagagcttgttgcctggagaatacaaaaag
agctatgagaagattcatctggacttcctgaaaagcgatcacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtaacctacaagaacgaggacaagctaaag
gacagggagagtggatttgatgagcagaggctgagtgctgacagtggatacatcattccc
ctgcctgacatcgaccctgtctctgaagatgagcttggcaaaagaaacagacacagttca
cagacatctgaagaaagtgccattgaaactggctccagtagctctaccttcatcaagaga
gaggacgagaccattgaggacattgacatgatggacgacattgggatcgactcctcggac
ctggtggaggacagtttcctgtaa
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