Sylvia atricapilla (blackcap): 136360065
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Entry
136360065 CDS
T10263
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136360065 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136360065 (FIP1L1)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136360065 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
136360065
NCBI-ProteinID:
XP_066173093
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Position
4:complement(6175130..6213187)
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AA seq
551 aa
AA seq
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MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSAPPPPGSEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLLKVQQGRTGNLEKELAVQSTKPDF
TSPPALFKSGIPTNRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIDSGHSSGYDGRSVRAFSYGSVTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERDR
ERSRDRDRDRDRDRDRDRTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSRE
KEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAP
EQENTEAAPVE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggctgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagaggccagaggaggaaaagtct
agtgctccacccccacctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaagacaggagctccacagtttagttatggagcagcacct
gtgaatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccagggagtattaatggtgtgccactcctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggggctgatctctctgattattttaac
tatggcttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgtatg
ggtcttgaaattttgccagttacctcaaccacaaataaaatcacggctgaagacaaagct
atggaagtaagaccaagtgcagagattctcgatggcagataccatcttttgaaggtacag
cagggcagaactggaaatttggagaaagagttggcagtgcagtcgactaaacctgatttc
acatctcctcctgccttattcaaatcaggaattccaactaacaggaggatatctggcaca
atagatgtgattggacagaccatcactatcagtagggtggaaggacgacgacgtgctaat
gaaaacagcaacatacaggttctttcagaacgctctaatcctgaagtagacagttttacc
aagccacctccatttttccctccaggagctccacctactcaccttccaccacctcctttc
ctcccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtatacca
ataacagtgccaccaccaggttttccaccaccacctggcggtcctccaccttccctcata
cccacaatagacagtggacattcttctggctatgatggtcgttctgttcgtgcattttca
tatggcagtgtcacctttccacaccctgcaggttctgcaccctcatggtctagtctcctg
gacaccagcaaacagtgggattactatgcacggagagagaaggacagggaacgtgacaga
gagagatcccgagatcgggatcgcgatcgggaccgagacagagatcgagaccgtaccaga
gaccgggagagggaccgagatcacagcccttcttcaagtgcgttcaacagtgatgaagaa
cgctacagatacagagactatgcagagaggggctacgatcgccataggacaagtagagag
aaagaagacagacacagagacaggagacacagagagaaagaagagactcgacacaagtca
tctcgaagtaacagcagacgtcgtcacgacagtgaagaaggggatagccacagaaggcac
aaacacaagaagtccaaaagaagcaaagaaggaaaagaagccagtggtgaacctgctcct
gaacaagaaaacactgaagctgcccctgtggaatag
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