Sylvia atricapilla (blackcap): 136360248
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Entry
136360248 CDS
T10263
Symbol
PEX1
Name
(RefSeq) peroxisomal ATPase PEX1
KO
K13338
peroxin-1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04146
Peroxisome
Brite
Membrane trafficking [BR:
sati04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
136360248 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
AAA_5
RNA_helicase
DUF815
AAA_28
TIP49
AAA_22
NACHT
AAA_33
ABC_tran
Sigma54_activat
AAA_18
AAA_29
AAA_2
TsaE
Sigma54_activ_2
AAA_19
AAA_7
Bac_DnaA
ATPase
CoaE
APS_kinase
Molydop_binding
Vps4_C
T2SSE
Motif
Other DBs
NCBI-GeneID:
136360248
NCBI-ProteinID:
XP_066173441
LinkDB
All DBs
Position
1:complement(23427872..23453840)
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AA seq
1290 aa
AA seq
DB search
MWGCGDPGGAAAATVVLSGTRDCFLHLPPALASLLRLQQGQAVKVSCGHQPVFLSWMETR
HRGHQGENIAEINRHLAEKLGITDGEQVFLEPCSHVSSCQQVEVEPLTADDWEILELHAP
SLERHLLDQIRVVFPGAVFPVWVEQHTHIYIRIGTLVPAAPYGRLEPCTELLICPKTHGP
EENITSTPATEGDLFLKNFVKNSMEQEETLKDPFAKQPYLKPGVLEQSKADASVTFGSNV
LPNIWNFIGNIFSNTSEQKQKTSSSDNNEMSTFQEKRLNLIHMDSIFRVCQSQPPSVQNV
STTHEFLKCNAAHIFPWNLEYIDLDPNPVVSYGKINQLLSPRQRHQEAKQNLPLEKQNHL
TTTQDKNPSDSNRGQASSEGSVVQIVWNGFEDLKSVIEYGHDGEALHVARVWIPDGLRKK
LHIEIHSTVRIKSVESIPKIPVSLTLQPKQNLHKDIHEDDVRCAFSSWLQDSTTDDHPWI
MTSTDCVHLSVKEGMEEFVLSAAHPVHIEEKKSENIFILSPSLLQKTNIQVLLHPPSRKT
DDDKQPPMPDRDKKLPYHKLSDLGGVDKLGTSLFEHISHSLLGRPLSQKLAANAVGLRSG
GVLLTGGKGSGKSTLAKAICKEAFTRLDAHVEVIDCKALRGKRLVNIRKHVEEAFLEAAW
RQPSILLMDDLDHIVGVPSTPEHENSPETVQSNRLAYVLKDLIKEVISMGSLIALIATSQ
SEHSLHPSLVSAQGTHIFQCFKCIRSPDQKQRYEMLYSIIKKKLNSDPKDFSDLDLQYIA
KETEGFVARDFTVLVDRAIHTWASNQNASDNGDLNLSAVDFQNALKDFTPLALRNASLHK
PKDIGWDRIGGLKDVKQVLKDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGV
VARESGMNFISIKGPELLSKYIGASEQAVRDIFNRAQAAKPCIVFFDEFDSIAPRRGHDN
TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQNSR
YEILKALSHSLSLANDVDFQDLAAKTEQFTGADLKALLYNAQLEAIHTNLNLGLTQDFAS
SSDSDFSLSSMVFLNHSSGSDDSAIDGEAGLEHSLISLDMSDLLPEDPRSNMYRLYFGSS
YESELGNGTPSELSSLCLSGPNSISYDFTSITQRDVASSQPAMLREASQEDSLENQEQQA
EHLRTEINASKTNYRSKNGEDSTLNQSVLPKTTLTITQSHLMTALQGMRPSISQEDWKHF
TELYDNFQNPKKSKVQIGATFRPGQKITLA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtggggctgtggggaccccggtggagccgccgccgccaccgtcgtgctgagcgggacc
cgcgactgcttcctgcacctgccgcccgcgctggcctcgctcctccgcctgcagcagggc
caagctgtgaaagtatcctgtggtcatcagccagtatttttgagctggatggaaaccagg
catcgaggtcaccagggtgaaaatattgcagagattaacagacatttggcagagaaactt
ggcatcacagatggagaacaggtgtttcttgaaccctgttcccatgtgtcctcctgtcag
caagtagaagtggaaccactcacagcagatgattgggaaattctggagctgcacgctccc
tccctggaaaggcatctccttgaccagatccgagtggtgtttcccggagccgtcttccct
gtctgggttgagcagcacacccacatttacatcagaatcggtacacttgtgccagcagcc
ccatatgggagattagagccatgcacggagcttctgatatgtcccaaaacacacggacct
gaggagaatatcaccagcacaccagccacagaaggtgacctcttcctcaaaaattttgtg
aaaaatagcatggaacaagaagaaacgttaaaggatccttttgccaaacaaccttactta
aagcctggagtccttgaacagagtaaggctgatgcaagcgtgacgtttggctcaaatgtt
cttccaaatatatggaatttcatagggaacattttctctaacacatctgagcagaaacaa
aagacttcgtcttctgataacaatgaaatgagcaccttccaagagaagcgtctgaactta
attcacatggattccatttttagagtatgtcagtcccagcctcccagtgtacagaatgta
tccaccactcatgaatttctgaaatgcaatgctgctcacatttttccatggaatttagaa
tatattgatttggatccaaatcctgtggtatcttatgggaaaattaatcagctgctttcc
ccgagacagcgtcatcaagaagcaaaacaaaatctgccacttgaaaagcaaaatcacttg
actactacacaagacaaaaatccttctgattctaataggggtcaagcatccagtgaagga
tctgttgttcaaatcgtttggaatggatttgaagacctaaagagtgtcatagagtatggc
cacgatggggaagcgctgcatgttgcaagagtttggattccagatggtctgagaaaaaaa
ctacatattgaaatacattcaacagtccgaattaagtcagttgaatctattcctaaaatt
cctgtatctcttacactgcaacccaaacagaacttacataaagatatacacgaagatgat
gttaggtgtgcattcagttcttggctgcaggattccactactgatgatcacccatggata
atgacaagcacagactgtgtacatctgtctgttaaagaaggaatggaggagtttgtcctt
agtgcagcgcatcctgtgcacattgaagaaaaaaagtctgagaatatttttatactgagt
cctagtttgctgcaaaagacaaatatacaagttcttttacatcctccaagtagaaaaact
gatgatgacaagcagccacctatgcctgatagagacaagaagcttccgtaccacaaacta
agtgatttaggaggagtggacaaattaggaacatctttatttgaacacataagccacagt
cttctggggcgtcctttatctcaaaagctggctgctaatgctgtgggactgcgaagtgga
ggggtgcttctcacaggaggaaagggaagtggaaagtcaacattagcaaaggccatctgc
aaagaagctttcactagactggatgctcatgtagaagtaattgattgtaaagccttaaga
ggaaaaagattagtaaacataagaaaacatgtggaagaagcttttttagaggcagcgtgg
agacaaccgtccattcttttgatggatgatcttgatcacattgttggagtaccttctaca
ccagagcatgagaacagccctgaaacggttcaaagcaatagacttgcttatgttttgaaa
gatctgataaaagaagtaatttccatggggagtttgattgcattaattgccacgagtcag
tctgaacattcccttcatccttccctggtttcagcacaaggaactcatatatttcagtgc
ttcaaatgtatccgatctccagatcagaagcaaagatatgaaatgctgtattccataata
aagaagaaactgaattcagatccgaaggacttctctgatcttgacctccagtatattgca
aaggaaacagaaggttttgttgctagagattttactgtgctggttgatcgtgccattcat
acttgggcttctaaccagaatgcatcagataatggtgatttgaacctgtcagctgtggat
tttcaaaatgctctaaaagattttactccattagctctgagaaatgccagccttcataaa
cctaaagatattggctgggacaggattggtggcttaaaagatgtgaagcaagtgctcaag
gataccatcatgttacctgcaaagtatccagaattatttgcaaacctgcccatacgacag
agatcaggagttttgctgtatggagcacctggaacaggaaaaacactcttggcaggagtg
gttgctagagagagtggaatgaatttcatcagcatcaagggcccagaactgctcagcaaa
tacattggagcaagtgaacaagcagttcgagatatatttaacagagctcaggcagctaag
ccttgtattgttttctttgatgagtttgattctattgctcctcgccgaggtcatgacaac
acgggagtcaccgaccgggtggttaaccagctgttgactcagttagatggtgtggaaggc
ctgcaaggagtttatgtgctagctgctaccagtcgcccggatttgattgacccagctttg
ttaaggccaggtcgactggataaatgcctgtactgtccacctcctgatcagaactcacgc
tatgaaatcttaaaagctctcagtcattccctgtccttggcaaatgatgtcgactttcag
gatttggcagcaaaaacagaacagttcacaggggctgacctaaaagctttattatacaat
gcccaattagaggcaatccatactaatttaaatttaggtttaacacaggattttgcatct
agttctgatagtgacttcagtctctcttccatggtttttctaaaccacagcagtggctca
gatgattcagcaatagatggagaagcagggctagaacactctctcatttctttagacatg
tctgacttgcttcctgaagatccaaggtccaacatgtatcgtctttatttcggaagctct
tatgaatcagagctgggaaatggaactccttcagaactgagctctttgtgtttgtccggt
ccaaactccataagttacgactttaccagcatcactcagagagatgttgcatcctcacag
cctgcaatgcttagagaagcttctcaagaagactccctggagaaccaggagcagcaagca
gagcacctgaggacagaaatcaatgctagcaagaccaattacagaagcaagaatggagag
gacagcacccttaatcagtcagtacttcccaagaccactttgaccattacccagtctcat
ctgatgactgctctgcagggtatgagaccatccattagtcaggaggactggaagcatttt
actgaactgtatgataattttcagaatcccaagaagagcaaagtacagattggtgcaaca
ttcagaccaggacaaaaaattactctagcttag
DBGET
integrated database retrieval system