Sylvia atricapilla (blackcap): 136360541
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Entry
136360541 CDS
T10263
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04010
MAPK signaling pathway
sati04210
Apoptosis
sati04218
Cellular senescence
sati04620
Toll-like receptor signaling pathway
sati04621
NOD-like receptor signaling pathway
sati04622
RIG-I-like receptor signaling pathway
sati04623
Cytosolic DNA-sensing pathway
sati04625
C-type lectin receptor signaling pathway
sati04920
Adipocytokine signaling pathway
sati05132
Salmonella infection
sati05164
Influenza A
sati05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136360541 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
136360541 (NFKB1)
04218 Cellular senescence
136360541 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
136360541 (NFKB1)
04621 NOD-like receptor signaling pathway
136360541 (NFKB1)
04622 RIG-I-like receptor signaling pathway
136360541 (NFKB1)
04623 Cytosolic DNA-sensing pathway
136360541 (NFKB1)
04625 C-type lectin receptor signaling pathway
136360541 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
136360541 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
136360541 (NFKB1)
05168 Herpes simplex virus 1 infection
136360541 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
136360541 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136360541 (NFKB1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
136360541 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
136360541
NCBI-ProteinID:
XP_066173963
LinkDB
All DBs
Position
4:complement(49735881..49783136)
Genome browser
AA seq
982 aa
AA seq
DB search
MAAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
SYLQAEGCGDRQLTEREREIIRQAALQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEAENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGSAGSGFSFPSYGYSAFGGMHFHPG
TTKSTAGMKHEGLSNCTAEQDRKSCDKQSDKWDVKRDVKVETVETTECRTSAFNEKKEDS
VSSCKAEVSEADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDD
NGDNVLHLAIIHLHTELVKNLLEVMPDLNYNAIINMRNDLYQTPLHLAVITKQAKVVEDL
LKAGADVSLLDRHGNSVLHLAAAEGDDKILSLLLRHEKVSPMVNLPNGEGLSAIHMVVMA
NSMSCLKQLIAAGVNINAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTT
PLHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDDEDDDEGIVPGTTPLDMAAN
CEVYDILNGKPYESAVVLEDLLTQGHLRELNENSKMQLYKLLELPDPTKNWSTLAQKLGL
GILNNAFRLSPSPSKTLLDNYEVSGGTIQELITALRQMDHTEAVKIIQEALSISHRPSSL
ENSIAEAVPSLPLTFANGETGEIYNSRFQDSESTCDSGVETSFRKLSFTCSDSLNSKPSL
TLGKMALGYGHESSGQSNYIAD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatattatgggagtgtctgatccccagatgtttgcggtggat
cagttcatgggaatgaatgctttatttaatagtacaaattacatcacttcagacttacca
ctacgaacagcagatggaccgtatcttcaaatcatagaacagccaaaacagagaggattt
cgtttccgatacgtgtgtgaagggccttcgcatggtggacttcctggtgcttctagtgaa
aagaataaaaaatcataccctcaggtcaaaatctgcaattacgttggacctgcaaaagta
attgtccagttagtaactaatgggaaatacgtccacttacacgctcacagcttggtgggt
aaattctgcgaagacggagtgtgcacggttaacgcaggacccaaggacatggttgtaggg
tttgcaaatcttggaatacttcatgtcacaaagaagaaagtgtttgaaactctggaaaca
cgcatgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccagaactc
agctatctgcaggcggaagggtgtggagacaggcaactgactgaacgggagagagaaatc
atccgccaggcagccctgcagcagaccaaggagatggatctcagcgtggtgcggctcatg
ttcacggccttcctccctgacagcaacggcagcttcacacggaaactcgatcctgttata
tcggatgcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatg
gacagaacagcggggtgtgtgacaggaggggaagagatctaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggctgagaatggtggtatgtgggaa
ggctttggagatttttctcctactgatgtacacagacagtttgctattgtgttcaaaaca
cccaagtacagagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtagg
aagtctgatctagaaacaagcgaaccaaagccttttctctactatccggagatcaaagat
aaagaagaagtgcaaaggaaacggcagaagctcatgcccaacttctctgatggctatggt
ggaggcagtggcaccggaggtggtggcatgtatggaggggcaggtggcagtgctggctct
gggttcagttttccttcatacggatactctgcttttggagggatgcatttccatcctggc
acaacaaagtccactgctggcatgaaacatgaaggtctatcaaattgcacagctgaacag
gacagaaagagctgtgataaacaaagtgacaaatgggacgtgaaacgtgatgtgaaggtg
gaaaccgtggagacgactgagtgcagaacatctgcttttaatgagaaaaaggaggattct
gtttcttcctgtaaagctgaagtgagtgaagcagattgcaggtggcaggatgccctgttc
ctggagaaggccatgcagcttgccaggcgccattgcaacgccctcttcgattatgctgta
actggagatgtgaagatgctgttggcagctcagcgccatctcaccgctgtccaggatgat
aatggggacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaac
ctcttggaagttatgcccgatttgaattacaatgccatcattaacatgagaaatgacctc
tatcagacccccctgcatctggcagtaatcacaaagcaggcaaaggtggtggaagacttg
ctgaaggctggggcagatgtcagccttctggatcgccatggcaattctgtcttacattta
gctgctgctgaaggagatgacaagattttgagtctgctcctcaggcatgagaaggtatct
ccaatggtcaacctccccaatggcgaaggtctcagtgcaattcacatggtggtgatggca
aatagcatgtcctgcctcaaacagctgattgctgctggagttaacatcaatgctcaggaa
caaaaatctggacgaactgcactgcatttggctgttgaacaagagaacatccccttggca
ggctgccttttgcttgagggtgatgctgatgtggacagcactacatatgatgggacaact
ccacttcatatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagca
ggtgcaaatcctcacattgagaactttgagccattgtttgatctagatgatgtgaaagat
gatgaagatgatgatgaagggattgtgcctggaacaacaccactggatatggcagccaac
tgtgaggtgtatgacatattaaatggcaaaccctatgagtcagcagtggtcttggaggac
ttactcacacaaggacatttgagagagttgaatgaaaattccaagatgcagctttacaaa
cttttggaattgcctgatccaactaaaaactggtccaccctagcacaaaaactgggtctt
ggcatacttaataatgcctttaggttgagcccttccccatcgaagacacttctggataat
tatgaggtttctggtggtacaattcaagagctgatcactgctttgagacagatggatcac
acagaagctgtaaaaataattcaggaagcactgtccatctcacacagaccatcttccctg
gagaacagtatagcagaagctgttccatcattaccactcacctttgcaaatggagagaca
ggtgagatctacaatagcagatttcaagacagcgaaagcacatgtgacagtggtgtggag
acgtccttccgcaagctgagtttcacttgctcagactctctgaacagcaagccctcacta
acacttggcaaaatggctctgggctatggacatgaaagttcaggacaaagcaattacata
gctgactag
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