Sylvia atricapilla (blackcap): 136360806
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Entry
136360806 CDS
T10263
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136360806 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sati04990
]
136360806 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
sati04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
136360806 (SYNPO2)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
136360806
NCBI-ProteinID:
XP_066174513
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Position
4:72042836..72338447
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AA seq
1160 aa
AA seq
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MDIKIEDHRESSTLQVNAAQEIPHGDLCITEIYSGTQHGAAESNTHFSETKPGATQSHRI
APKAIGTPTVIVTDEAAGRGMTEERPGAVVELQLSLPKEMHKATKAPAVTVLGTEKCPPA
GRGAAAQQDGSSPLIALPLAAKEGNVQWSNKVVHFSSSKEVKRIQGVAPSIPRVEVILDC
SDRDKEAPRSPYERGCVDSQVEGGQSEAPPSLLSFAISPEATVQGEDSKHSEKEHRPLKH
RARHARLRRSESLSEKQVKEAKSKCKSIALLLTAAPNPKSKGVLMFKKRRQRARKYTLVS
YGTGELERDEDEGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDKDGKIVTFDWDS
GLLEVEKKTKSGEEMQTLADSTGKGALMFAKRRQRMDQITAEQEEMKASTVQTEEHRETK
VTENFQEVSSSIYQSKEEEMSRQQTCVSKSHTDVSQNHSKVVQQNGFGLAPGTNLSFQCS
GTQKPASLNKTAKPFPSGVQNRAAAPFSPIRNVTSPLSDAAAPPPYCSVSPPAEAFYRPV
SAPVASRAAPPAWAAPEPTEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFNFKDAPKV
SPNPALLSLVHNAEGKKGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPS
LKVSPSAGTPVSPVWSPSAAASNKPPSFPAPASPQAAYPAPPKSPQYPHSPVHPPSTLDL
AGPFKGPQASLASPNLAPKATPVTPSAGETKPPFEMPPAMSGKGAQLFARRHSRMEKYVV
DSETVQANMARASSPTPSLPASWKYSSNVRAPPPVAYNPILCPSYPPAATKPSSKAAAAT
KNTKRKPKKGLNALDIMKHQPYQLDPSLFTFQPPKESLAMKQASKLSTSKLPLPTYLPPG
AGSPTRARPSSVYSVPAYGSQPSFPSNASLPGNESYSPMGYSAFSKPEATTSSLFTAPRP
KFSAKKAGVTAQGRSSGRSLSLPGRPSSFIPRAMSPTSPLVFQPAPDYFSKADAAADKPG
KRLTPWEAAARSPLGLVDEAFGPQSMQESIAANVVSAARRKTLPEPPDEWKLKVSYEPPA
PSGSVAWLGGKQSGVLSPQKGSLAAPSAPSQAGPKLQYPYCTQRSTTDPDILSMDSRSDY
CLSTADSNYNPQPRGWRRPT
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggacataaaaattgaggaccatagggagagcagcacactgcaagtgaacgcagcacaa
gagataccccacggagatttatgcatcacagagatttacagtgggacccagcacggagcg
gcagaaagcaacacacacttttctgaaacaaaaccaggggccacacaaagccacagaatt
gctcctaaagcgataggcacccccacagtgatcgtgacagatgaggctgctggcagaggg
atgacagaagaaaggccaggtgccgtggttgagctgcagttgtccctcccaaaggaaatg
cacaaggccaccaaggcccccgctgtgacggtcctggggacagagaagtgcccccctgca
ggcagaggagccgctgcccaacaggacgggagcagccccctgatcgcacttcccctggct
gcgaaggagggcaacgtccagtggtcgaacaaagtagtccacttctccagcagcaaggag
gtgaagaggatccaaggcgtggctccatccatccccagggtggaggtgatcctggactgc
tcggacagggacaaggaagcgcccaggtctccgtatgaaagggggtgtgttgactctcaa
gtagaaggagggcagtcagaagcacctccttccctcctctcctttgcaatctcgccagaa
gccacagtgcagggagaagacagcaagcactcggaaaaggagcacagacctctcaagcac
agagccaggcacgcaaggctccgacgaagcgagagcctgtccgagaagcaggtcaaagaa
gccaaatctaaatgtaaaagtattgcactgctgctgacggcggctcccaaccccaaatcc
aaaggggtgttgatgttcaagaagcgccgccaaagggcaaggaaatacaccttagtcagc
tacgggactggggagttggaacgtgacgaggacgagggcgaagagggggaaggtgaagag
ggggacaaggaaaacacttttgaggtgagtttgcttgcaacgagcgagtcggaaatagat
gaagatttcttctctgacattgacaaggacggtaagatcgtgacctttgactgggacagt
ggtctgctcgaggtggagaagaagacaaaaagtggggaggagatgcagacgcttgcagac
agcacagggaaaggggccctcatgtttgccaagaggaggcagaggatggatcagattaca
gcggagcaagaggagatgaaggcaagcacagtgcagacggaggagcacagggaaaccaaa
gtgacagagaactttcaggaagtgagctcttccatctatcaatcaaaggaggaggagatg
tcgagacagcagacctgtgtgagcaaaagccacacagacgtgagccagaatcacagcaaa
gtggtacaacaaaacggctttggcttagcacccggcacaaacctctctttccagtgctct
ggaactcaaaagccagcgtctttgaacaaaacagcaaaacccttcccttctggagttcaa
aaccgagcagctgcaccattttcacccataagaaatgtcaccagccccctttcggatgct
gcagcaccacctccttactgctctgtcagcccaccagctgaggccttctacagacctgtc
tcagctcctgtggccagcagggctgccccgcccgcatgggcagcccccgagcccacggag
cacatcgcgtccagggatgaaaggattgctgtgccagccaaaaggaccggcatactgcag
gaggccaagagaagaagcacttccaaacccatgttcaatttcaaagacgcacccaaagta
agtcctaatcctgccctgttgtcccttgtacacaatgcagagggcaaaaaagggaccgga
gctggttttgagtcagggcctgaagaagactacctcagtttgggagcagaagcttgcaat
ttcatgcagactcaagcatctaaacaaaaggcccctcctcctgttgctccaaagccttca
ctcaaggtgtctccttctgctggtactccagtttccccagtttggtcgccttccgctgcg
gcttccaacaagcctccttctttcccagcaccagcctcacctcaggcagcatatcctgca
ccacccaaatctccacagtatcctcactctcccgtccaccccccaagcactctggacctc
gctggtcctttcaaagggcctcaggccagcctggcgagtcccaaccttgcccccaaggca
acgccagtcactccgagcgctggagaaacaaagcctccctttgagatgcccccagctatg
agtgggaaaggagcgcagctgttcgccaggaggcattcccgaatggagaagtacgtggtg
gattcagagactgtgcaggcaaacatggcacgagcctcatctccaactccatctttacca
gcttcttggaaatattcatccaatgtccgagcacctccacccgtcgcttataatcccatc
ctctgcccctcttaccctcctgctgctaccaagccttcctctaaggccgctgctgctacc
aaaaacacaaaaagaaaacctaagaaaggtctcaacgctttggatattatgaaacaccaa
ccttaccaactcgacccgtctttatttaccttccaacctcctaaggaaagccttgctatg
aagcaggcatcgaagctgtccacctcaaagctgcctttacctacctaccttccacctggg
gccggctctcccaccagggcccggccctcttcggtgtactcggtgccagcctacggctcc
cagccttcgttcccgtccaacgcctctctcccaggaaacgaatcctactcgcccatgggc
tactctgccttttctaagccagaggccaccacctcctctttgtttactgctccgaggcca
aagttttcagccaagaaagctggcgtcactgcacagggaagaagcagcggccgctcattg
tcgcttcccgggagaccttcttcattcattcctcgagccatgtctcccacttctcctctt
gtatttcagcctgcccctgactacttcagcaaggcagatgcagcagctgacaagcctggc
aagagactgactccctgggaagcagcagccagatctcccctcggcctagtggatgaagct
tttggcccccagagcatgcaggaatccattgctgctaacgtggtatcagctgctcgcagg
aaaacgcttcctgagccaccagatgaatggaaacttaaagtttcttatgagcctccagcc
ccaagtggtagcgtagcctggctaggagggaagcagtcgggggttctatcaccccaaaaa
ggctccctggctgccccaagtgcccccagccaggctggccctaagctgcagtatccctac
tgcactcagcgctccacaacggatcccgacatcctgtccatggattccaggtctgactat
tgcttgtcaacagctgattccaactacaatccacagccaaggggatggaggcgtccaaca
tga
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