Sylvia atricapilla (blackcap): 136361035
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Entry
136361035 CDS
T10263
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04510
Focal adhesion
sati04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136361035 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136361035 (LAMB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
136361035
NCBI-ProteinID:
XP_066174771
LinkDB
All DBs
Position
5:9518215..9562208
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AA seq
1784 aa
AA seq
DB search
MGRLPLYLCCCLALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWQVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGLEEEVEGMVHGHCMCRH
NTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCDCNGHSSQCHFDMAVYMSTGNTSGGVC
DDCQHNTVGHHCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDSYTDFSTGLI
AGQCRCKSFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCK
RLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMFGRQCNQ
VEPGYYFVSLDHYIYEAEEADLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGGYLEFHID
NIPYSMEYDVLIRYEPQLPDQWEKAVINVSRPGKISTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELPQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDVETGQCHC
FPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPITLQVVCVCSVGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACDKRTGACLKCLYHTEGENCHLCREGYYGSALQ
QDCRKCVCNYLGTVREDCEGSGSCRCEAATGQCRCLPNVVGLTCDRCAPHTWRLASGTGC
ERCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPSVECLACDCNPRGIQT
PQCDRATGQCICNEGVEGLHCDKCSRGYSGFFPDCVPCHQCFALWDVIISELANRTQQFL
DRANTLKITGVTGPYQKTLSTLEEKLTEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVT
VKIADIEENLAALAAKSNSTDMDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVDPDSAVELSAQTRREVEDLINEKEAQFKAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTAPGASCESQCGGLSCRTEEGKKKCGGPGCDGLVTVAHNAWQ
KAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLRN
LIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVILQ
QSAGDIARAEMLLEEAKRASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIKG
TQDLLTSIESENAASAETLNNATLRLFELEKSVEDLRQKAATNSGNVGNIEDKIISAKQN
AEEVKKVLTDELSGKYRTVEELIAKKTEESAEARRKAGVLQDEAKALLAQANSKLQLLKD
LEDTYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctcccgctgtacctctgctgctgcctggcgctgtggcccgcggcggcacag
gagcccgagtacagctacggctgcgccgagggcagctgctaccccgccaccggcgacctg
ctcatcggccgcgccgcccgcctctccgcctcgtccacctgcggcctccgccagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgactcggag
gatcccttccatgatactctcaatcccgacagtcatcgcattgaaaatgtcgtcaccacg
tttgctccaaaccgcctgaagctctggtggcagtcggaaaatggtttggaaaatgtgact
atccagctggacctggaggctgagtttcatttcactcatctcattatgaccttcaagaca
ttccgtcctgctgcaatgttgattgaaagatcatctgactttggacagacttggcaagtt
tacaggtattttgcatatgactgtgagagctcatttcctgggatttcaactggacccatg
aagaaagtggatgatataatttgtgattcccgatactctgacattgagccttcaacagag
ggagaggtaatatatcgtgttctagatcctgcttttcgaattgaagatccatacagtcca
aggattcagaacctattaaaaatcaccaacctgagagtcaagtttgtcaagctgcacacg
ctgggggataacctgctggactccaggatggagatccgagagaagtattactatgccatc
tacgacatggtggtgcgcgggaactgcttctgctacgggcacgccagcgagtgtgcgccc
gtggagggcttggaggaggaggtggaaggaatggttcatggtcactgcatgtgcagacac
aataccaaaggattaaactgtgagcagtgtatggatttctaccacgacttaccctggcgc
cctgctgaaggtcgcaatagtaacgcatgcaaaaagtgcgactgcaatggccactccagc
cagtgccactttgacatggcagtgtacatgtcgacggggaacaccagcgggggagtgtgt
gacgactgccagcacaacactgtggggcaccactgcgagcagtgcaagcccttctacttc
cagcaccccgagagagacctgcgggaccctgacgtctgtgagccttgcaactgcgaccca
gctggctcccaaaatggtgggatctgcgacagctacactgatttctccactggcctcatt
gctggacagtgccgctgtaaatcatttgtggaaggggagcgctgtgacctctgcaaagaa
ggtttctatggcctgagtgctgatgacccagcgggatgtcagtcttgtgcgtgtaatccc
ctgggtacccaccccggggggaatccttgtgattcggagacaggaaactgctattgtaag
cgtctggtgacaggaaagcagtgcaatcaatgtctgcctgagcactggggcctgagcaat
gacatggatggatgtcggccgtgcgactgtgaccagggaggagcactgaacaacaactgc
tcaagtgaatctggccagtgtgaatgtcgaccccacatgtttggacgtcagtgcaaccag
gtggagcctggctattacttcgtttcacttgatcattacatctacgaggccgaggaagcc
gacttgggtcctggagtgaacataatagagcgccagtacacgccagaccgcacaccgtca
tggacaggcattggatttgtgagagtccctgaggggggatacctggaattccacattgac
aacatcccctactccatggagtatgatgttctgatccgctacgagccgcagttgcctgat
cagtgggaaaaagctgtgatcaatgtctcgcgcccaggcaagatttccacgggtagccgg
tgtggcaacacagttcctgatgatgataatcaagtggtctcactgtcacctgggtccaga
tacgttgttctgccacggcccgtgtgctttgagaaggggctgaattacaccatccgcctg
gagctgccccagtactcctcggtggatacggagacagagaacccctacacactcattgac
tctcttgttctcatgccatactgcaaatcgctggacatattcacagtgggaggctcgggc
gaagacgtggtcacgaacagtgcttgggaaactttccaaagataccggtgtttggaaaac
agcaggagcgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagcatt
tctgcactgctgcatgagactgcgttatcatgccagtgtgacccgcagggctccctgagt
tccgtgtgtgaccccaacggaggacagtgccagtgtcgtcccaacgttgttggaagacag
tgtgacagatgtgcccccggcacctttgggtttgggccaagtggatgccgaccgtgcgag
tgccacgtccgaggctcctacaacgccttctgcgacgtggagacgggccagtgccactgc
ttccctggggtgtacgggcggcagtgcgaccgctgcctgcccagcttctggggcttcccc
agctgccagccctgccactgcaatggccacgctgatgactgcaacccctacaccggggag
tgcctcagctgccgggaccacactgcggggcacaactgtgagaggtgccaggctggctac
tatggagaccccatcctgggatctggtgaccactgccgcccctgcccctgccccgacggc
cccgagagtggacgccagtttgccagtggctgttaccaggatccaatcacactgcaagtc
gtgtgtgtctgtagtgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttc
tttgggagccctgatgaggttggcggcgcctgccagccgtgccagtgcaacaacaacatc
gacaccaccgacccagaggcctgtgacaagaggacaggggcgtgcctgaagtgcctgtat
cacaccgagggtgaaaactgccacctctgcagagagggctactacggcagtgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcacggtgcgggaggactgcgagggc
tcggggagctgccgctgcgaggcggccacggggcagtgccggtgcctgcccaacgtggtg
gggctgacgtgtgaccgctgtgccccgcacacgtggcggctggccagcggcacgggctgc
gagcgctgtgactgcgaccccgcgcgatccctcggtcccgcctgcaacgagttcaccggg
cagtgccactgcatgccgggtttcggaggccggacctgccgggagtgccaggagctcttc
tggggtgacccgagtgtggagtgcttagcctgtgattgcaaccctcgtggcattcagacc
ccgcagtgtgaccgtgccactgggcagtgtatctgcaatgaaggggtggaagggctgcac
tgtgacaagtgctcccggggatactcaggcttcttccctgactgcgtgccgtgccaccag
tgcttcgccctctgggatgtgatcatcagcgagctggctaataggacccagcagttcttg
gacagggctaacaccctcaaaatcactggagtcactggcccataccagaagacgctcagc
acactggaggagaagctcactgaaattaaaaccatcatcgctcaaaatccagcagccgag
cccctgaagaacatcgggaatctcttcgaggaagcagaaaagctgacagcagatgttaca
gtgaagatagctgacatagaagagaacttagcagccttagcagcaaagagcaatagcaca
gacatggacctgagtgcgctggagacagatgccaaaagtctcgaccacgttgtgaaagaa
cttgcagagcagctagagttcatcaagatctctgatgttcggggagccttggatagtatc
accaagtatttccagatgtccctggaggcagaggagagggtcaatgcctccactgttgat
cctgatagcgccgtggagctgtcagcgcaaacgcggcgggaagtggaagacttaatcaat
gagaaggaggcccagttcaaggctaaacaagaggagcagtcgcgccttctggatgaactc
gctggaaagctgcagagcctggatctctctgaggtggctgagaagacgtgtggcactgcc
ccgggagcctcctgtgagtcccagtgcgggggattgagctgtcggacagaggaagggaag
aagaagtgtggaggccctggctgtgatgggctggtgactgtggctcacaacgcctggcag
aaggctatggattttgacagagacatcctcagtgcattagcagaagttgagcaactctcc
agaatggtttctgaggcaaaacagagagcagatgaggcaaaacaaaatgcacaagcagtt
ttgctcaaaaccaacgctacaaaagaacaagtggacagaagcaatgaagatctgagaaat
cttatcaaacagattagagacttcctaatgcaagacagcgctgacctggatagcattgag
gcagtagctaatgaagtgctgaacatggagatgccaagcactccccagcagctgcaggcc
ctgacagaagatattcgtgagcgtgtagaaagcctttctgatgtcgaggtcattctgcag
cagagcgctggagacattgccagggcagaaatgctactggaggaagccaaaagagcgagc
aaaggtgcaacagatgttaaagtcactgcagacatggtgaaagctgcactagaagaagct
gaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaagga
actcaagacctgctgacttcaattgaatctgaaaatgcagcatctgcagagacactgaac
aatgcaaccttacgtctgtttgagctagagaagagtgttgaagaccttaggcaaaaggct
gctacaaattcagggaacgtgggaaatatagaagacaaaattattagtgcaaaacaaaat
gctgaagaagttaaaaaggtcctcaccgacgagctgagcggcaagtacaggacagtggaa
gagctcattgccaagaagacagaggagtcggcagaggccaggaggaaagcaggcgtgttg
caagacgaagctaaagccttgctggctcaagcaaacagcaaactccagctgctcaaagat
ttagaagacacgtatgaaaacaaccaaaaagttctggaagacaaggccaagcagttggtg
gagctggaagagacagttcgctccctcttacagacaatcagccagaaggttgctgtttac
agcacttgcttataa
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integrated database retrieval system