Sylvia atricapilla (blackcap): 136361139
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Entry
136361139 CDS
T10263
Symbol
RBM17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136361139 (RBM17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136361139 (RBM17)
Spliceosome [BR:
sati03041
]
Complex A
U2 snRNP components
U2 related factors
136361139 (RBM17)
Complex B
136361139 (RBM17)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
136361139
NCBI-ProteinID:
XP_066174956
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Position
5:complement(20334762..20347041)
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AA seq
401 aa
AA seq
DB search
MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQTTVLAPVIDLKRG
SSSDERQIVDTPPHVAAGLKDPVPSGFSAGDVLIPLADEYDPMFPNDYEKVVKRQREERQ
RQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTS
LVEKDKEPVASFPYEEESRPRAPSSKAAIPPPVYDEPERPRSPTGPSNSFLANMGGTVAH
KIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGESTEKETGKKADSNPLTEIL
KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFE
RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAEQV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcactttacgatgacctgggggttgagaccagcgattccaaaacagaaggctggtcc
aagaatttcaaactgctgcagtctcagctgcaggtgaagaaagcagctctcacacaagca
aagagtcagagaacaaaacaaaccacagtccttgctccagtgattgacctgaaacgaggc
agctcctctgatgagagacagatcgtggacacaccccctcatgtagcagctgggctaaag
gatcctgtccctagtggtttctctgcaggagatgtgttgattcccctggcagatgagtat
gatcccatgttcccaaatgactatgagaaggtggtgaaacgtcagagggaggaacggcag
cggcagcgggagctggagaggcaaaaggagattgaagagagagaaaaaaggcgtaaagac
agacatgaagccagtggcttttccagacgaccagatccagattctgatgaagatgaagat
tatgaaagggagaggcggaaaagaagtatgggaggagctgccattgcaccacccacttct
ctcgttgagaaggacaaagaacctgtagcatcattcccgtatgaggaggagtcgagacct
cgggcaccttcttccaaagcagcaattcctcctccagtctatgatgagccagagagacct
cgttctcccacaggacccagcaactccttcctggccaacatgggggggacagtagctcac
aaaatcatgcagaaatatggtttcagagagggccaggggctgggcaaacatgaacagggg
ctcagcacagcactgtcagtagagaaaacaagcaagaggggtggcaagatcattgttggt
gaatctacagaaaaagaaacaggcaagaaggcagattccaaccccttgactgagatactg
aaatgcccaactaaagtggtcttactgaggaacatggttggtgctggggaggtggatgaa
gaccttgaagttgaaactaaggaggaatgtgagaaatacggcaaggttgggaaatgtgtc
atctttgagatccctggtgcccctgatgatgaagctgtaagaatatttttagagtttgaa
cgggttgaatctgccatcaaagctgttgtggatctaaacggaagatattttggaggcaga
gtggtgaaggcttgtttctacaacctggacaagttcagagtgctggatctggcagaacaa
gtttga
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