Sylvia atricapilla (blackcap): 136361198
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Entry
136361198 CDS
T10263
Symbol
TNPO3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
sati03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136361198 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136361198 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sati03016
]
136361198 (TNPO3)
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
136361198 (TNPO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
136361198
NCBI-ProteinID:
XP_066175035
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Position
5:23420814..23441767
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AA seq
925 aa
AA seq
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MERGPGRPSLQLVQQAVQALYHDPDPSGKERASCWLGELQRSVHAWEISDQLLQIHQDVE
SCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQ
MASWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSS
TVVSLLVTCVEKAGNEEKMLIKIFRCLGSWFNLGVLDSTFMANSKLLSLLFEVLQQDKTS
SNLHEAASDCVCSALYAIENVETNLPLALQLFQGVLTLESAYHMAVAREDLDKVLNYCRV
FTELCETFLDKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTDD
AVIHSIFKAYIQRLLHALARHCQLDSDHEGVPEETDDFGEFRMRVSDLVKDLIFLVGSVE
CFAQLYATLKDGNPPWEVTEAVLFIMASIAKSVDQENNPTLVEVLEGVVRLPESVHTAVR
YTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCDRRLASAAAKAIHNICSVCRDHMAQHF
SGLLEIARALDSFALSPEAAVGLLKGTALVLARLPLEKISECLSELCAVQVLALKKLLSQ
EPSNGLSSDPTVPLDRLAVIFRHTNPIVENGQVHPCQKVIQEIWPVLSETLNKHSADNRI
VERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYREHQHSCFLYLGSILVDEYGMEEGCR
QGLLDMLQALCIPTFQLLEQPNGLQNHPDTVDDLFRLAARFIQRSPVTLLRSQVMIPILQ
WAIAATTLDHRDANCSVMKFLRDLIHTGVANDHEEDFEVRKELINQVMTQLGQQLVNQLL
QTCCFCLPPYTLPDVAEVLWEIMQIDRPTFCRWLENSLKGLPKETTGGAIQVTHKQLTDF
HKQVTSAEECKQVCWALRDFTRLFR
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgggccgggccggcccagcctgcagctcgtccagcaggccgtgcaggcgctc
tatcacgaccccgaccccagcggcaaggagcgggcgagctgctggctgggcgaactgcag
cgctcggtccatgcctgggagatctcagaccagctgctgcagatccaccaggatgtggag
tcctgctacttcgctgcacagaccatgaagatgaagatccagacttcattctatgagctc
cccacggattcccacgcctcgctccgggactctttgctctcacacatccagaacttgaag
gacctgtccccggtcattgtcacacagctggctttggcaatagctgacctggccctgcag
atggcttcgtggaagggctgtgtgcagacactggtggagaagtacagcaatgatgtgaca
tcactgcccttcctgctggagatcctgacggtgctgcccgaggaggtgcacagccgctcc
ctgcgcatcggcgccaaccgccgcaccgagatcatcgaggacctggcctactactccagc
accgtggtgtcactgctggtgacgtgtgtggagaaggcaggcaatgaggagaagatgctc
atcaaaatcttccggtgcctgggcagctggttcaacctgggggttctggacagcaccttc
atggccaacagcaagctgctgtccctcctcttcgaggtgctgcaacaggacaagacctcg
tccaacctgcacgaggctgcgtcagactgcgtgtgctcggccctctacgccatcgagaat
gtggagaccaacctgcccctggccctgcagctcttccagggcgtgctcaccctcgagagt
gcctatcacatggctgtggcacgggaggacctggacaaggtgctcaactactgccgtgtg
ttcaccgagctgtgcgagaccttcctggacaagatcgtgtgcacgccgggccagggcctg
ggcgacctgcgcacgctagagctgctgctcatctgcgccgggcacccgcagtacgaggtg
gtagaaatttcctttaacttctggtatagactgggggagcacctgtacaagacggatgat
gcagtgatccacagcatcttcaaagcctacatccagcgcctgctccacgcactggcccgg
cactgccagcttgactctgaccatgagggtgtcccggaggagaccgatgactttggggag
ttccggatgcgtgtctcggacctggtgaaagacctgatcttcctcgtgggctcagtggag
tgctttgcgcagctctatgcgacactcaaagatgggaacccgccctgggaggtgacagaa
gctgtgctcttcatcatggcctccatcgccaagagcgtcgaccaggagaacaacccgacg
ctggtggaggtgctggagggcgtggtgcggctgcccgagtcggtgcacacggccgtgcgc
tacaccagcatcgagctggtgggcgagatgagcgaggtggtggacaggaacccgcaattc
ctggatcctgtgctgggctacctgatgaaggggctgtgtgaccggcgcctggcgtcggcc
gcggccaaggccatccacaacatctgctccgtgtgccgggaccacatggcccagcacttc
tcggggctgctggagatcgcccgcgccctcgactccttcgcgctgtcgcctgaggccgct
gtggggctgctcaaggggacagcgctggtgctggcccggctgcccctggagaagatctcg
gagtgcctgagcgagctctgcgccgtgcaggtgctggcgctcaagaagctgctctcccag
gagccaagcaatggcctctcctcagaccctacagtgcccctggatcgacttgccgtcatc
ttcagacacaccaaccccattgtcgagaacggccaggtccacccgtgccaaaaagtcatt
caggagatctggccggtgctgtcggagaccctgaacaagcacagtgccgacaaccggatc
gtggagcggtgctgccgctgcctgcgcttcgccgtgcgctgcgtgggcaagggctcggcc
gcgctcctgcagcccctcgtcacacagatggtgaatgtgtaccgggaacaccagcactcc
tgtttcctctacctgggcagcatcctggtggatgagtacggcatggaggagggctgccgg
cagggcctgctcgacatgctgcaggctctctgcatccccaccttccagctcctcgagcaa
cccaatggcctccagaaccacccggacaccgtggatgacctcttccgcctggcagccagg
tttatccagcgcagccccgtcaccctcctgcgcagccaggtgatgatccccatcctgcag
tgggccatcgctgccaccaccctggaccaccgggatgccaactgcagcgtcatgaaattc
ctgcgggatctgatccacaccggtgtggccaatgatcacgaggaggactttgaagtgcgg
aaggagctcatcaaccaggtgatgacccagctggggcagcagctcgtgaaccagctcctg
cagacatgctgcttctgcctcccgccctacaccctgccggacgtcgccgaggtgctctgg
gagatcatgcagatcgaccgcccgacgttctgccgctggctggagaactcgctgaagggg
ttgccaaaggaaaccacgggcggagccatccaggtgacacacaaacagctcaccgacttc
cacaagcaggtcaccagtgctgaggaatgtaaacaagtctgctgggctctgagggacttc
acccgcctgttccgatag
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