Sylvia atricapilla (blackcap): 136361223
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Entry
136361223 CDS
T10263
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati02010
ABC transporters
sati04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136361223 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
136361223 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136361223 (CFTR)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
136361223 (CFTR)
Transporters [BR:
sati02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
136361223 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
T2SSE
RsgA_GTPase
DUF87
MeaB
NTPase_1
Intein_splicing
AAA_23
Motif
Other DBs
NCBI-GeneID:
136361223
NCBI-ProteinID:
XP_066175077
LinkDB
All DBs
Position
5:complement(23912847..23999969)
Genome browser
AA seq
1485 aa
AA seq
DB search
MQRSPLEKANIFSKLFLRWTNPILKKGYRRRLELSDIYQIPSADSADNLSEKLEREWDRE
LATSEKKPKLINALRRCFFWKFMFYGIILYLGEVTKSVQPLLLGRIIASYDPDNSEERSI
AYYLGIGLCLLFFVRPLLIHPAIFGLHHIGMQMRIAMFSLIYKKILRLSSRVLDKISTGQ
LVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLLWDMLEASAFAGLAFLIVVVLFQAW
LGQMMMKYRNKRAGKINERLVITSEIIENIQSVKAYCWEDAMEKMIENIRETELKLTRKA
AYVRYFNSSAFFFSGFFVVFLAVLPYALIKGIILRKIFTTISFCIVLRMTVTRQFPGSVQ
TWYDSIGAINKIQDFLLKKEYKALEYNLTTTGVELDKVTAFWDEGIGELFVKASQENNSK
VPSTDSNLFFSNFPLHASPVLKDINFKIEKGQLLAVSGSTGAGKTSLLMLIMGELEPSQG
KIKHSGRISFSPQVSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFPDKDYTL
LGEGGIILSGGQRARISLARAVYKDADLYLLDSPFGHLDIFTEKEIFESCVCKLMANKTR
ILVTSKLEHLKIADKILILHEGSCYFYGTFSELQGQRPDFSSELMGFDSFDQFSAERRNS
ILTETLRRFSIEGEGMGSRNEIKKQSFKQKSDFNDKRKNSIIINPLNANRRFSVVQKNGL
QVNGIDDGHSDPAERRLSLVPDLEQGDVALLRTGMLKADHLLQGQRRRQSVLNLMTSPSV
NYGPNFTKKGSTTFRKMSMVPQTNLSSEIDIYTRRVSRDSVLDITDEISEEDLKECFSDD
AESMGTVTTWNTYFRYVTIHKNLIFVLILCVTVFLFEVAASLAGVWFLQKTALKANTTQS
ENSTSDKPPVIVTDTSSYYIIYIYVGVADTLLAMGIFRGLPLVHTLITVSKTLHQKMVHA
VLHAPMSAFNSWKAGGMLNRFSKDTAVLDDLLPLTVFDFIQLILIVIGAITVVSILEPYI
FLASVPVIAAFILLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFE
TLFHKALNLHTANWFLYLSTLRWFQMRIEIIFVVFFVAVAFISIITTGDGPGTAGIILTL
AMNIMGTLQWAVNSSIDVDSLMRSVGRIFKFIDMPTEETKSITPQKNNQFSDALVIANKH
VKEEKNWPSGGQMTVKDLTAKYGEGGAAVLENISFSISSGQRVGLLGRTGSGKSTLLFAF
LRLLNTEGDIQIDGVSWNTVSVQQWRKAFGVIPQKVFIFSGTFRMNLDPYGQWNDEEIWK
VAEEVGLKSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLD
PVTSQVIRKTLKHAFANCTVILSEHRLEAMLECQRFLVIEDNKLRQYESIQKLLSEKSSF
RQAISHAERLKLLPAHHRNSSKRKPRPQITALQEETEEEVQETRL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtctccgctggagaaggcgaacatcttctccaaacttttcctaagatggaca
aacccaattttgaaaaagggttacagacgacggttggagctgtcagatatttatcaaatc
ccttctgcagactctgctgataatctttctgaaaaactggaaagagaatgggacagagag
ctggcaacttcagagaagaaacccaaactcattaatgctcttcggcgatgttttttctgg
aaatttatgttctatggaataattttatatttaggggaagtcaccaaatctgtgcaaccc
cttctgctggggagaataatagcttcctatgatccagacaactctgaggaaagatccata
gcctactacctgggcattggtttgtgccttctcttttttgtgagaccactgcttatacac
cctgctatatttggtcttcatcacattggaatgcaaatgaggatagctatgtttagcttg
atttataagaagatcttaagactgtcaagcagagttctagataaaataagtactggacaa
ctggtcagtcttctttccaacaatctgaacaaatttgatgagggtcttgctctggctcat
tttgtatggattgcaccattacaagtggcactgctgatgggattgctctgggatatgtta
gaagcttctgcattcgctggacttgcttttctaatagtcgtggtcttattccaagcctgg
ctgggacaaatgatgatgaaatacaggaataagagagcaggaaagatcaatgagagactt
gtcatcacgtcagaaataattgaaaatatacagtcagttaaagcttattgttgggaagat
gcaatggaaaaaatgattgaaaacatccgtgaaactgaactgaagcttacacgaaaagct
gcttatgtgagatatttcaacagctcagctttcttcttctcaggcttttttgtggtgttc
ttagctgtgcttccatatgctttgattaaaggaattattctccgaaaaatatttaccacc
atttccttctgcattgttcttcgaatgacagtgaccaggcagtttcccggctctgtgcag
acctggtatgactctattggagcaataaacaaaatacaggatttcttgctgaaaaaagaa
tataaagctctggagtataatctaacaaccactggggttgagctggacaaagtaacagct
ttttgggatgagggaattggagagctgtttgtaaaagcaagccaggaaaacaacagcaaa
gttcctagcactgacagcaatctcttcttcagtaatttcccccttcatgcctctcctgtt
ctcaaggatataaatttcaagattgagaaggggcagctattagctgtttctggatctact
ggagcaggcaagacttctcttctgatgttgataatgggggaattggagccttcgcagggt
aaaattaaacacagtggaaggatatccttttcacctcaagtttcctggatcatgcctgga
acaataaaagaaaacataatttttggtgtatcctatgatgaataccggtacaggagtgtc
atcaaagcctgccaactagaagaggatatttccaagttcccagacaaagattatacactt
ctgggtgaaggtggaatcattctgagtggaggtcaacgagcacgaatctcactggcaagg
gcagtgtacaaagatgctgatttgtatctcctggattctccttttggacacttagacatc
tttacagaaaaagagatatttgaaagctgtgtgtgcaagctgatggcgaataaaactagg
atcttggttacttcaaaactggaacacttaaagattgctgacaaaatattaatcttacat
gaaggaagttgctatttctatggaacattttctgaacttcagggtcaacggccagacttc
agctcagagctgatgggatttgattctttcgatcagttcagtgcagagagaagaaattcc
atccttactgagactctccgacgattttccattgaaggagaaggcatgggatcacgcaac
gaaataaagaagcagtcttttaaacaaaaatcagattttaatgacaaaaggaagaactcc
ataattattaacccccttaatgcaaacaggaggttctcagtagtgcagaagaacgggctg
caggtcaatgggatagacgatggccacagtgacccggcggagaggaggctctcgctggtt
cctgacttggagcagggggacgtggccctgctgaggactggcatgctcaaggctgaccac
ctgctgcaggggcagaggaggaggcagtcagtgctgaacctgatgacgagcccctctgtc
aactatggaccaaactttaccaaaaagggaagcacaacgtttcggaaaatgtctatggtg
cctcagacaaacctgtcttctgagatagatatctacaccaggcgtgtgtctcgagacagt
gtcttggacataactgatgaaatcagtgaggaggatttgaaggagtgcttcagtgatgat
gctgaaagcatgggtactgttactacgtggaatacttatttcagatatgttactatccac
aaaaacttgatttttgttctgattttgtgtgtgaccgtcttcttgtttgaggtagctgct
tctcttgctggggtatggtttcttcaaaagacagctttgaaggcaaatacaacacagtca
gaaaacagcacctctgacaaacctcctgtgattgtcactgacactagcagctactacatc
atttacatctatgtgggtgtggcagatactctgcttgccatgggaatcttcagaggtttg
ccccttgtgcatacccttataacagtgtctaaaactcttcatcaaaagatggtgcatgca
gtccttcatgcacctatgtcagccttcaactcttggaaagcagggggtatgcttaacaga
ttctcaaaagatacagcagtactggatgacttacttccacttacagtatttgacttcatt
cagttaatactgattgtgattggcgctataacagtagtctcaatattagaaccctacatc
ttcctggcatcagtgcctgtgatagcagcctttattctgttaagggcatacttcctccac
acttctcagcagctgaaacaactggaatctgaagctcggagtccaattttcacccacctt
gttacaagcctaaaagggctgtggacactgagggcttttgggcggcagccatactttgag
accttatttcacaaagctctgaacctgcacacggcaaactggttcctctacctgtcaaca
ctgcgctggttccagatgaggatagaaatcatttttgtggtcttttttgttgctgtggca
tttatctctatcataactacaggtgatggaccaggtacagctggaattattcttactcta
gctatgaacatcatgggaaccttgcagtgggcagtaaactcaagtatagatgttgatagt
ttgatgcggtctgtgggacgaatatttaaattcattgacatgccaacagaagagacaaaa
agcattacgccacagaagaataatcagttttcagatgcccttgtaattgcaaacaagcat
gtgaaggaagagaagaactggccatctgggggccaaatgactgtgaaagaccttacagcc
aaatatggtgaaggaggagccgctgtactagaaaacatttccttttcaataagctcaggg
cagagggtaggccttttaggaagaacaggttcaggaaaaagcactttactttttgcattt
ttaagactgctgaatacagaaggggatatccagattgatggagtctcctggaacacagtc
agtgtgcagcaatggagaaaagcatttggagtgatacctcagaaagtgttcatattttct
ggaacttttcggatgaatttggatccttatgggcagtggaacgatgaagaaatatggaaa
gttgcagaggaggtcggtctgaagtctgtaatagagcaatttccaggcaagcttgatttt
gttcttgtggatggaggctgtgtcctcagccatggccacaaacagctgatgtgcctcgcc
cggtcagttctcagcaaagctaaaatcctgctgctcgatgaaccaagtgctcacctggac
cctgtaacttcccaagtgatcaggaagaccctgaagcacgcatttgccaactgcacagtg
atactctccgagcacaggctggaggcgatgctggagtgccagagatttttggtaatcgag
gacaataaactgaggcagtacgaatccattcagaagctgctgagtgagaagagctccttc
aggcaggccatcagtcatgctgagcgccttaagctgctcccagcacaccacagaaactcc
agcaaacgcaagccccgaccccaaatcactgccttgcaggaggagacggaggaggaagtg
caggagacaagactgtga
DBGET
integrated database retrieval system
