Sylvia atricapilla (blackcap): 136361546
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Entry
136361546 CDS
T10263
Symbol
CALD1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
136361546 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sati04812
]
136361546 (CALD1)
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
136361546 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
136361546
NCBI-ProteinID:
XP_066175646
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Position
5:complement(54635780..54808250)
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AA seq
779 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERLSYQRNDDDDEEAARERRRRARQERLRQKEEGDLSG
EGTEKSEVNAQNSVAGEESKRSTDDEAALLERLARREERRQKRLQEALERQKEFDPTITD
GSLSVPSRREVNNVEENETTGKEEKAETRRGRYEIEETETATKSYQRNNWRQDGEEEEKK
EAKDKEEVQEEKPKEENQVDVTAEKSTDKEEAVTVNAEEHKAENDTNAVPEGTQSVTDAV
ESEKLRDEEKAEAERKEAEERERLKAEEEKRAAEEKQRAEEEKRAAEEKQRAEEEKRAAE
EKQRAEEEKRAAEERAKAEEEKRAAEEREKAKAEEERRAAEEKQKAEEEKRAAEERAKAE
EEKRAAEEKAKLEAEKLKEKQKIEEQKMEDKQVKEKKVEDEKPRAAFLKKQEEEKVEAKK
EKLPEEKLQATSIKDQVKDDKGKPPKEEMKSVWDRKKGVPEQKAQNGEREPPASKLKPTE
NAFGRSSLKGSMEEAKPGVEALKRLEDQRRRRGENESEELEKLKEKQQEAAAELDELKKR
REERRKILEEEEQKKKQEEAERKIREEEEKRRMKEEIERRRAEAAEKRQKMPEDGVSEDK
KPFKCFSPKGSSLKIEERTEFLNKSAQKSGMKPTQTTAVVSKIDSRLEQYTSAIEGTKAS
RPAKASDLHVPAEGVRNIKSMWEKGNVFSSPSGTGTPNKETAGLKVGVSSRINEWLTKTP
ESNKSPAPKPSDLRPGDVSGKRNLWEKQSVEKPAASSKVSATGKKSETNAGLRQFEKEP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgaacgccgcagagaactcaggaggcaaaagcgtgaggaaatgcgcctg
gaagcagagaggctgtcctaccagagaaacgatgacgatgacgaagaagccgccagagaa
cgtcgccggcgggctcggcaggagaggctgcggcaaaaggaagaaggagatctctcagga
gaaggaacagagaaatctgaggttaatgcccaaaacagtgtggcaggagaggagagcaag
cgttccacagacgatgaagctgcgttgttggagaggctggcaagacgggaggagagacgc
caaaaacgtctgcaggaagccctggaacgtcaaaaggagtttgaccccacgatcacagat
gggagcttgtcagtgcccagcaggagagaagtaaacaatgtggaagaaaatgagaccacg
gggaaagaggaaaaggctgaaacacgccgaggacgctacgagattgaggagacggaaaca
gccaccaaatcctaccaaaggaacaactggaggcaagatggggaagaagaggaaaaaaaa
gaagcaaaagacaaggaggaggtacaggaggagaaaccaaaggaggaaaatcaggtagat
gtgacagcagaaaaatccacagataaagaagaggcagtaactgtaaatgcagaggagcac
aaagcggagaatgatacaaatgctgtgccagaagggacgcaaagtgtaactgatgctgta
gagagtgagaagcttagggatgaggaaaaggctgaggcagaaaggaaggaagcagaagaa
agggagaggttaaaagcagaagaagaaaagagggctgctgaggaaaaacagagagcagag
gaagaaaagagggctgctgaggaaaaacagagagcagaggaagaaaagagggcagctgag
gaaaaacagagagcagaggaagaaaagagggcagctgaggagagggcaaaggcagaagag
gagaagagggcagctgaggaaagagagaaggctaaagcagaagaggagaggagggcagct
gaggaaaaacagaaagcagaggaagaaaagagggcagctgaggagagggcaaaggcagaa
gaggaaaagagggcggctgaggaaaaggctaaactagaagcagagaaattaaaggaaaaa
caaaagatagaagaacagaaaatggaagataaacaggtaaaagagaagaaagtagaagat
gaaaaacctcgagcagcttttttaaaaaaacaggaggaagaaaaagtggaagctaaaaag
gaaaagctgccagaagagaagctccaagctacctccataaaagatcaggtaaaagatgac
aaaggtaaaccacccaaagaggaaatgaaaagtgtctgggatcgtaagaaaggcgtccct
gaacaaaaggcacagaatggagaacgtgaaccccctgcctccaaacttaaacctactgag
aatgctttcggccgctccagcttgaaggggagcatggaggaggcaaagccgggggtggag
gctctgaagaggctggaggatcagaggcgtcgccggggcgagaacgagagcgaggagctg
gagaagctgaaggagaagcagcaggaggcagcagcagagctggatgagctgaagaaaagg
cgggaagagcgccggaaaatcctggaggaagaggagcagaagaagaagcaggaggaggct
gagagaaaaatcagagaggaggaggaaaagaggaggatgaaggaagaaatcgaaagaaga
agggctgaagctgctgagaaacgccaaaagatgccagaagatggtgtatctgaagacaag
aagccatttaaatgtttcagtcctaaaggttcatctctcaagatagaggagcgaacagaa
tttttgaacaaatctgctcaaaagagtggtatgaagcccacccagacaacagcagttgtc
tcaaagattgacagtagacttgagcaatacactagtgcaattgagggaacaaaggcttca
agaccagctaaagcttctgaccttcacgttccagctgagggtgtccgtaacatcaagagc
atgtgggagaaagggaatgttttttcatcaccttctgggacaggaacaccaaataaggaa
actgctggactgaaggttggtgtctccagtcgtatcaatgagtggttgaccaagacccca
gagagcaacaaatcccctgctccaaaaccttctgatttaagaccaggagatgtatctggc
aaacgtaatctctgggagaagcagtcagtggagaagccagctgcttcttctaaggtatca
gctacagggaaaaaatcagagactaatgcaggtttgagacaatttgagaaagaaccgtag
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