Sylvia atricapilla (blackcap): 136361594
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Entry
136361594 CDS
T10263
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
136361594 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136361594 (YBX3)
03041 Spliceosome [BR:
sati03041
]
136361594 (YBX3)
Transcription factors [BR:
sati03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
136361594 (YBX3)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136361594 (YBX3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
Bim_N
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
136361594
NCBI-ProteinID:
XP_066175712
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All DBs
Position
5:58234290..58251178
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AA seq
283 aa
AA seq
DB search
MSEAPETSTASPAPAAPPVPAAAAAPPAPAAPDAAPKSAAAPGAAVAEAAPGAAAAPTTA
AAESKKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDG
ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSQGGEGEI
KDGVTEGGQLQQVHRNPTYRPRYRRGPPRPRPAPVTGEAENKENHHEANAMSQQPLRRGY
RRPYNYRRRPRPASAPAQEGKETKATETPAENPAPVTEQSGAE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgccggagaccagcaccgccagccccgcgcccgccgcgccgcccgtcccg
gccgcggctgccgcgccgcccgcgcccgccgccccggacgccgctcccaagagcgccgcc
gcgccgggtgcggctgttgccgaggcggcccccggtgccgccgccgcacctacaaccgcg
gcggccgagtcgaagaagaaagtgctggcaaccaaagttcttggcacagtcaagtggttc
aatgtcagaaatggatatggctttatcaacagaaatgataccaaagaagatgtgtttgtt
catcagacggcgataaagaaaaacaatccacggaagtacctgcgcagcgttggcgatgga
gagactgtagaatttgatgtggtggagggagagaagggtgcagaagcagcgaatgtcact
ggtccggatggagtcccggtggaaggcagccgctatgccgcagaccggcgccgctatcgc
cggggctactttggtcgacgccggggcccacctcggagtcagggtggtgagggagaaatc
aaggatggggtcacagaaggaggacaacttcagcaagtgcacaggaatcctacctaccgt
ccccgctatcgcagagggccccctcgcccacgccctgctccagtgactggagaggctgag
aacaaggagaaccatcacgaggccaatgccatgagccagcagccgctgcgccgcggctac
aggcgcccctacaactaccggcgccggccgcgccccgccagcgctccggcacaggagggc
aaagagacaaaggcaactgaaacacctgctgaaaatcctgccccagtgacagagcagagt
ggtgctgagtaa
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