Sylvia atricapilla (blackcap): 136361833
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Entry
136361833 CDS
T10263
Symbol
PDGFB
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04010
MAPK signaling pathway
sati04020
Calcium signaling pathway
sati04510
Focal adhesion
sati04518
Integrin signaling
sati04540
Gap junction
sati04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136361833 (PDGFB)
04020 Calcium signaling pathway
136361833 (PDGFB)
09133 Signaling molecules and interaction
04518 Integrin signaling
136361833 (PDGFB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136361833 (PDGFB)
04540 Gap junction
136361833 (PDGFB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
136361833 (PDGFB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sati04052
]
136361833 (PDGFB)
00536 Glycosaminoglycan binding proteins [BR:
sati00536
]
136361833 (PDGFB)
Cytokines and neuropeptides [BR:
sati04052
]
Cytokines
Growth factors (RTK binding)
136361833 (PDGFB)
Glycosaminoglycan binding proteins [BR:
sati00536
]
Heparan sulfate / Heparin
Growth factors/receptors
136361833 (PDGFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
136361833
NCBI-ProteinID:
XP_066176129
LinkDB
All DBs
Position
5:complement(69704844..69720179)
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AA seq
273 aa
AA seq
DB search
MPEAGRPRGCLREALPSRGSLSMCPQPAAPGVGMNFGVVLAFILSLPLARMEGDPIPEDI
YEILSGSSVRSISDLQRALRIDSVEWDSSSLNLNATQRNQNPVALSRERRSIDALAAAET
AVLAECKTREVVFEISRNMVDSTNANFVVWPPCVEVQRCSGCCNNRNVQCRPTQIRVRHV
RVNKIEFVQRKPKFTKVVVPLEDHVQCRCEAVFQPPPRNIRPGTHEQRRLSPAFTTAAVS
QRRRVRRPPAQKRKHKKYKHVNDKKVLKEILIA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggccgggcggccgcggggctgtctgcgggaagcgcttccctcccggggctcg
ctgtccatgtgcccgcagccggcggcgcctggagtcgggatgaatttcggcgtggtcttg
gcgttcatcctctcgctgcccctggcccgcatggagggggaccccatacccgaagacatt
tatgagattttgagtggcagctcagtgcgctccatcagcgacctccagcgtgccctgcgg
atagactccgtagagtgggatagctcgagcctgaacctgaatgcaactcagcgcaatcaa
aaccctgtggccctgtctcgagagcgacgaagcatagatgctctggcagcagcagagaca
gccgtcctcgccgagtgcaagacacgggaggtagtcttcgaaatctcccgcaacatggtg
gacagcaccaacgccaacttcgtggtgtggccgccctgcgtggaggtgcagcgctgctcc
gggtgctgcaacaaccgcaacgtgcagtgccgccccacgcagatccgcgtccggcacgtc
cgggtgaacaagatagaatttgtccagaggaagccaaaattcacaaaagtcgttgtgcct
ttagaggaccacgtgcagtgtcggtgtgaagctgtgttccaaccaccccccaggaacatc
cgtccagggacacatgaacagagacgcttgtcaccagcgttcaccacagccgctgtctca
cagaggcggcgagtacgccggccgccagcacagaagaggaaacataagaagtacaagcat
gtcaacgataagaaagtgctgaaagaaatcctcatagcatag
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