Sylvia atricapilla (blackcap): 136361887
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Entry
136361887 CDS
T10263
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
136361887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136361887
Transporters [BR:
sati02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
136361887
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
136361887
NCBI-ProteinID:
XP_066176218
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Position
5:71354876..71377970
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AA seq
600 aa
AA seq
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MGKMDNTSVELNSPSEVKQAALEEPEPISPEVMGTKKKKKEIPDRGSWKGKFDFLLSCVG
YAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFLLETALGQYTSVGGLGVWRLA
PMFKGVGLAAMVLSFWLNIYYIVIIAWALYYLFNSFTADLPWQNCGNAWNTDRCFSNYSL
NDTTNLTSAVTEFWERNMHQMSGGLGEPGTIRWPLAGTLALAWLLVYFSIWKGVEWTGKV
VYFSATYPYFMLFILLFRGVTLPGAKEGILFYLTPDFRKLSDSEVWMDAATQIFFSYGLG
LGSLIALGSYNTFHNNVYRDSIIVCCINSTTSIFAGFVIFSIIGFMSHITKKSVSELASS
GPGLAFLAYPQVVTQLPLSPLWSILFFSMLMMLGLDSQFCTVEGFITALMDEYPRVLRAR
KKIFIAVVCFISYLIGFSNITQGGIYVFKLFDYYSASGMCLLFLVFFETISISWCYGVNR
FYRNIEEMIGYKPCIWWKICWAFFTPLVCLGVFFFSVVEMTPLTLGKYIYPAWGQGIGWL
MALSSMVLIPGYMLYSFFTSTGTLWQRLQQMTQPRPEAHAQNNGLQPKTSLNGSISDAAV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatggacaacacctctgtggagctgaactccccctctgaagtgaagcaggca
gccctggaggagccggagcccatcagccctgaggtcatgggcaccaagaagaagaagaag
gagatcccagacagaggttcctggaaggggaaattcgacttcttgctatcctgcgtgggc
tatgctataggtctgggcaacgtctggcgcttcccttatctctgtggcaaaaatggagga
ggggccttccttatcccctatttcctgacgctggtgtttgccgggattcctctcttcctg
ctggaaactgctctgggccagtatacctctgttggtggactgggagtctggagattagca
cccatgttcaaaggcgtggggctggcagctatggttctgtccttctggctgaacatctac
tacattgtcatcatcgcctgggctctctactatctcttcaactccttcactgcggacctg
ccgtggcagaactgtgggaatgcctggaacacagaccgttgcttctccaactactccctg
aacgacaccaccaacctcaccagcgctgtcaccgagttctgggagaggaacatgcatcag
atgtccggaggcctgggggagcctggcaccatccgctggcccctggctggcacgctggcc
ctggcctggctgctggtctacttctccatctggaagggtgtggagtggacaggcaaggtg
gtgtatttctcggccacctacccctacttcatgctcttcatcctcttgttccggggagtc
acactgccgggagccaaggaggggatcctcttctacctcacgcctgacttcaggaagctc
tctgactctgaggtctggatggacgcagccactcagatcttcttctcctacggcctgggg
ctgggctccctcattgctctgggcagctacaacactttccacaacaacgtctacagagac
tccattattgtctgttgtataaactccaccacaagcatatttgctggatttgttattttc
tctatcattggcttcatgtcacacatcacgaagaagtcggtgtcagagctggcctcctca
ggccctgggctggctttccttgcctacccacaggttgtcacacagttgcccttatccccg
ctctggtcaatcctcttcttctccatgttgatgatgctgggtctggacagccagttctgc
actgtggaaggtttcattacagccctgatggatgagtatcctcgagtcctaagagccagg
aagaagatcttcattgcagtagtctgcttcatctcttatctcattggattctccaacatc
acccagggtggcatttatgtcttcaagctgtttgattactactcagccagtggcatgtgt
cttctttttcttgtcttctttgagaccatctcaatttcttggtgttatggtgtgaacagg
ttttacaggaacattgaagaaatgattggctacaagccttgcatctggtggaagatctgc
tgggccttcttcacacctcttgtctgcctgggcgtgttcttcttcagtgtggtggaaatg
acccctctgacactgggaaaatacatctatcctgcgtggggacaaggcattggttggctc
atggccctgtcctccatggttctgattccagggtacatgctctactctttcttcacctca
acagggactctctggcagcgtttgcagcagatgacacagcccaggccagaggcgcacgcc
cagaacaacggcctgcagcccaagacgtccttgaacgggagcatctcggacgccgctgtg
tag
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