Sylvia atricapilla (blackcap): 136361940
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Entry
136361940 CDS
T10263
Symbol
NUP107
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136361940 (NUP107)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136361940 (NUP107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136361940
NCBI-ProteinID:
XP_066176320
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Position
5:34374762..34433837
Genome browser
AA seq
1009 aa
AA seq
DB search
MRSHPALRAHLRAVRRRSPPRAGRSRTRPEGRRHGGPIPPRGRGGAGRPRACAGGGARGQ
PCPRPPLPPPPPRQSEAGRAASRRRPRAAPRHRRRAEPSGAQRAQRSGIGRRGGGARSAG
SGGAVRNGFEDMPSPHDPEMVRPGRKQGSQKRVSILTSLDDTIGNMTPKSQFLSRTPNSL
LHQPGTAFHRSSMKPSDMSAILGTGGKSPLILPNSGLFGSLSMLDESSWTMALSPQKTGM
FVNADTSNMTEDVTMSAVLLREDDPGEAATMSMYSDFLHSFLKHTSTTIFELVDEYENIC
NSQVNILGKIVYRATPGQQKFSKTASVLWLLKQEMVTWRLLSSIYRDRIQSALEDETTFD
ITALTASEKTTVDNLFQKDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKTVYWDNTL
HSLKQRQSSTYMGSSRPLVTELDPDAPIRQKLPLDDLDQEDDARLLKYLFTLIRAGMTDE
AQRLCKRCGQAWRAATLEGWKLYHDPNINGGKELEPVEGNPYRCIWKISCWRMAEEEQFN
RYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDTLVEQEIRTSVVTAEEMEELPRD
YLETNWTSEKVFEELQATDKRRVIEENQEHYHVIQKFIILGDVDGLMEEVSRWLSKDRSV
LPGHLLRFMTHLILFFRTLGMQTKEEVSVEVLKTYIQRLVSEKHTDLIAFYVSHLPPELA
VAQYALFLEDVTESDQRHHCLELAKEAGLDVATITKTVVENIRKKDAGEFSHHDHVLDAG
TTEADQLKIDVXDWLVFDPAQRAEALKQSNAIMRKFWASKKHEAAKDVFVKIPQDSIAEI
YNQWEEQGMDTPLPAEDDNAIREHLCIRAYVEAHETFNEWFKHMNSAPQKPSLLPQASFT
EKVAHEHKEKKYEMDYGIWKGLWMLLQLMLRRKMYNVLLFVDGGWMVDVREDAEDDPERT
HQMILLRKLCLPMMCFLLHTVLHSXGQHQECLRLADMVASERHKLYTVS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccaccccgcgcttcgggcgcaccttcgagccgtacggaggcgcagcccgccc
cgggccggccgcagcaggacgcggcccgaggggcggcgccatggcggcccgatcccgccg
cggggccggggtggggcggggcggccgcgcgcgtgcgcagggggcggcgcgcggggtcag
ccctgcccgcgcccgcccctccctccgcccccgccgcgccagagcgaggctgggcgtgcg
gcgtcacggcgacggccccgagccgcgccccggcacaggcggcgagcggagccgagcgga
gcgcagcgggcgcagcgcagcgggatcggccggcgaggcggcggcgcgcggtcggcgggg
agcggaggcgctgtccgaaatggttttgaagacatgccatccccccatgatccagagatg
gtcagacctgggcggaagcaaggctctcagaaaagagtttctattcttacatccctggat
gacactattggaaacatgacacccaaaagccagtttctttcccgaactcctaattcatta
cttcaccagccaggtactgcattccatcgcagctccatgaagccatcagatatgtctgcc
atcctgggaacaggaggaaaatctcctctcattctaccaaattctggactttttggcagt
ctgtcaatgttggatgaaagtagctggaccatggcactctcgcctcagaagacaggaatg
tttgtaaatgcagacacgtccaatatgacagaagatgtcactatgagtgctgtgttgctg
cgtgaggatgatcctggggaagctgctactatgagcatgtactcagactttctgcattcc
tttctgaagcatacatcaactaccatttttgaacttgtggatgagtatgaaaatatttgt
aacagtcaggtgaatatattagggaaaatagtttatcgggcaactcctggacagcagaag
ttttccaaaactgccagtgttttgtggcttctcaagcaggaaatggtgacttggagattg
ctgtcctcgatttatagagacagaatacagtctgcactggaagatgaaactacatttgat
atcactgctttaactgctagtgaaaaaacaactgtagacaacttgtttcagaaagattca
cttgttcgacaaagtcagctggtggtggattggctggagagcattgctaaggatgaaatt
ggcgacttctccgataatattgagttttatgcaaaaactgtatattgggataacacactg
cactccctgaagcagcgacagtcaagtacatacatgggaagttctcgtcctctggtaaca
gaattggatccagatgctcctattcgacagaaactgccacttgatgatttggaccaagaa
gatgatgcaaggctgctaaagtatctcttcactctcatcagagcaggaatgacagatgag
gcacagcgcttatgcaaacgatgtggtcaggcatggagagctgcaactttggaaggctgg
aaattgtatcatgatcctaacataaatggaggaaaagagctggagcctgttgaaggcaat
ccatacaggtgcatttggaaaataagttgttggcgcatggctgaagaggagcagtttaat
agatatgaaagagcaatctatgcagccctaagtggaaacctcaaacagcttcttccagtt
tgtgatacctgggaagatactgtttgggcatatttcagggtcatggtggacactctagtg
gagcaggaaatacgaacctcagtagtaactgcagaggagatggaagagctccctagagat
tatttagaaacaaactggacttcagaaaaagtttttgaagaacttcaggcaacagacaaa
aggagggttatagaggagaatcaagaacactatcatgtgattcagaaattcattatactt
ggagatgtggatggtttgatggaagaagtcagcaggtggctttccaaagacagaagtgtg
ctcccaggacacctccttcgtttcatgacacatcttattctgtttttccgcactttgggt
atgcagactaaggaggaagtttctgttgaagtcctgaagacctacattcagcggttggtg
tctgagaagcacacagatctaatagcattttatgtcagccacctgcccccagagctcgct
gtggctcagtacgctttatttcttgaagatgttactgagagcgatcaacgccaccactgc
cttgaattagcaaaagaagcaggtctggacgttgcaacgataaccaaaactgttgttgag
aacatccgcaagaaggacgctggggagttcagccaccatgaccatgtgctggatgcaggc
acaacagaggcagatcagctgaaaatagatgtantggactggctcgtattcgatcctgca
cagagggcagaagcacttaagcaaagcaatgcaatcatgaggaagttctgggcatccaag
aaacatgaagctgcaaaagatgtgtttgtgaagattccccaagactctatagcagaaata
tataaccagtgggaagagcagggaatggatactccacttccagccgaagatgacaatgct
atccgggaacatttgtgtattcgtgcatatgtggaagcccatgaaacctttaatgaatgg
tttaaacacatgaactcagctccacagaagccttccttgttaccacaagcaagtttcact
gagaaagtggcccatgaacataaagaaaagaagtatgagatggattatggcatttggaaa
ggcctctggatgctcttacagctgatgctaaggaggaaaatgtacaatgtgttgctcttt
gttgatggtggatggatggttgatgtcagagaggatgctgaggacgaccccgagcgaacc
caccagatgatcctgctgcgaaagctgtgcctgcccatgatgtgcttcttgctgcacacg
gtgctgcacagcnacgggcagcaccaggagtgcctgcgcctcgctgacatggtcgcctcc
gagcgccacaagctctacacggtgagctag
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