KEGG   Sylvia atricapilla (blackcap): 136362124
Entry
136362124         CDS       T10263                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati03420  Nucleotide excision repair
sati04120  Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:sati04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     136362124 (DDB1)
DNA repair and recombination proteins [BR:sati03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      136362124 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      136362124 (DDB1)
SSDB
Other DBs
NCBI-GeneID: 136362124
NCBI-ProteinID: XP_066176501
LinkDB
Position
6:complement(639001..650807)
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKSLVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSLDTGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcctacaactacgtggtgacggcgcagaagccgacggctgtcaatggctgcgtcacc
ggacacttcacctctgcggaggacctgaacctgctgattgccaagaacacccggctggag
atttatgttgtgacagctgaggggctccggcccgtcaaggaagtgggaatgtacgggaaa
accgccgtcatggagctcttccgccccaagggggagagcaaggatttgctgttcatcctg
acggccaagtacaacgcctgcatcctggaatacaagcagaacggggatagcatcgacatc
atcacccgtgcccatggaaatgtgcaggatcgcatcggccgcccctcggagaccgggatc
atcgggatcatcgatcccgagtgccggatgatcgggctgcggctctacgacggcctcttc
aaggtcatccccctggatcgggagaacaaggaattaaaggctttcaacatccgcctggag
gagctgcaggtcatcgatgtgaaattcctttacggctgccaagctcccaccatctgcttc
gtctaccaggacccccagggccgccatgtgaagacatacgaggtgtccctgcgggagaag
gaattcaacaagggcccttggaagcaggaaaacgtggaggccgaagcctccatggtcatc
gcagtgccggagcccttcggaggtgccattatcatcgggcaggaatccatcacctaccac
aatggggataaatatctggctatcgctcctcccatcatcaagcaaagcaccatcgtgtgc
cacaaccgtgtggatcccaacggatcacggtatttgctgggagacatggaagggcggctc
ttcatgctgctcctggagaaggaggagcagatggatggcactgtcaccttgaaggatctg
cgtgtggagctgctgggagagacatccattgccgagtgcctgacctacctggataacgga
gtggtgtttgttggctccaggcttggagattcccagctcgtgaagctcaacgtggacagc
aatgagcagggatcctatgtggtggccatggagaccttcaccaacctcgggcccatcgtg
gacatgtgtgtggtggacctggagaggcaaggccaaggccagctggtcacctgctctggg
gccttcaaagagggatcgctgcggatcatccggaatggcatcggcatccacgagcatgcc
agcatcgacctgccgggaattaaaggattgtggccgctgaggtcggatccgcaccgggag
acagacaacaccttggtgctgtcctttgttggccagaccagggttctgatgttgaacgga
gaggaagtggaagagacggagctcacgggatttgtggatgaccagcagacgttcttctgc
ggcaatgtggcacatcagcagctgatccagatcacctctgcctcggtgcgactggtcagc
caggagcccaaatccctggtgagcgagtggaaagaacccaatgggaagaacatcagcgtg
gcttcctgcaacagcaaccaggtggtggtggctgtgggaagagccttgtactacctggaa
atccggccccaggagctccggcagatcagctgcacagagatggagcatgaggtggcctgc
ctggacatcacccccctgggagactccaacgggatgtcccctctctgtgccatcgggctc
tggaccgacatctctgcccgcatcctgaagctcccgtccttcgagctgctgcacaaggag
atgctgggaggagagattatccctcgctccatcctgatgacgaccttcgagagcagccac
tacctcctgtgtgccctgggggatggagctctcttctatttcggcctcagcctcgacaca
ggcttgctgagtgacaggaagaaggtgaccctgggcacgcagcccacagtgctgaggaca
ttccgctccttgtccaccaccaacgtgttcgcctgctccgaccgccccaccgtcatctac
agcagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc
ccgctcaattccgacggatatcccgacagtttggccttggccaacaacagcaccctgacc
atcggcaccattgatgagatccagaagctgcacatccgcaccgttcccctctacgagtcg
cccaggaaaatctgctaccaagaggtatcccagtgttttggggtgctctccagccggatc
gaggtgcaggatgccagtggaggcaccacggcactcagacccagcgccagcacccaggcc
ttgtccagcagcgtgagcaccagcaagctgttttccagcagcacggctccacacgagaca
tcctttggagaggaggtggaagtgcacaacctgctcatcatagaccagcacaccttcgaa
gtgcttcatgctcaccaattcctgcaaaatgagtacgccctcagtctggtctcctgcaag
ctgggaaaggatcccaacacctacttcattgtgggcactgccatggtgtatcccgaggaa
gcggagcccaagcagggccggatcgtcgtcttccactactctgatgggaagctgcagagc
ctggctgagaaggaggtcaagggagctgtgtattccatggtggaattcaacgggaagctg
ttagccagcatcaacagcacggtgcgcctgtacgagtggacagcagagaaggaattgcgc
acggaatgcaaccactacaacaacatcatggccctgtacctgaaaaccaagggggatttc
atcctggtgggagacctcatgcgctccgtgctgctcctggcctacaaacccatggaaggg
aatttcgaggagattgcccgggatttcaatccaaactggatgagcgccgtggagatcctg
gatgatgataatttcttgggagcggagaatgctttcaatctgtttgtgtgccagaaggac
agcgcggccacgactgacgaggagcggcagcacctgcaggaggtgggattatcccacctg
ggagagtttgtcaatgtcttctgccacggatccctggtcatgcagaacttgggggagact
tccacgcctacccagggatccgtgctcttcggcactgtcaatggaatgatcggcctggtg
acatccttgtcagaaagctggtacaacctgctcctggacatgcagaacaggctcaacaaa
gtcatcaagagcgtggggaagattgagcattccttctggagatcattccacaccgagcgg
aagacggaaccagccacgggattcatcgatggagacctgattgagagtttcctggacatc
agcaggcccaagatgcaggaagtggtggcaaacctgcagattgacgatggaagcgggatg
aagagggaagccaccgtggacgacctgataaagatcgtagaggagctgacccggatccat
tag

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