Sylvia atricapilla (blackcap): 136362223
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Entry
136362223 CDS
T10263
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136362223 (BMAL1)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
136362223 (BMAL1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
136362223
NCBI-ProteinID:
XP_066176666
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Position
6:8864674..8912661
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AA seq
633 aa
AA seq
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MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD
KDDQHGRLEYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPANGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTTVLDSGDTAFPQLAASPHSMDSVLQAGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS
SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGMDMIDTEQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcttctacaattagtgactttatgtcaccagatcct
gctgacttgatctccagttcccttagcacttcaggaatggactgtaacaggaaaagaaag
ggaagctcaactgattatcaactcgatggctttccttttgaggaaggtatggatacagat
aaagatgaccaacatggaagattggagtatgcagaccaacaaggcaggataaaaaatgca
agggaggctcacagccagatcgagaagaggcgccgggataagatgaacagtttcatcgac
gagctggcctcgctggtgcccacctgcaacgccatgtcccgcaagctggacaagctcacc
gtgctcaggatggctgtccagcacatgaaaacacttcgtggtgctacaaacccttatacg
gaagcaaactacaagcctgcttttctatcagatgatgaattaaaacatcttattctcagg
gcagcagatggatttctttttgttgtgggctgtgacagaggaaagatactgtttgtttca
gaatctgtcttcaagatcctcaactacagtcagaatgatttgattggtcaaagtttattt
gattatctccatcctaaagacattgccaaagtgaaggagcagctctcttcttctgacact
gcaccacgagaaagactcatagatgcaaaaaccggactcccggtcaagacggacatcacg
cccgggccctcgcgcctctgctccggagcgcggcgctccttcttctgcaggatgaagtgc
aacaggccctctgtcaaagtagaagacaaggatttcccttcaacctgctcaaagaagaaa
gcagaccgcaaaagcttctgcactattcacagcacaggctacttaaaaagctggcctccc
accaagatgggcctggatgaagacaacgagccagacaacgagggctgcaatttgagctgc
ctggtggccatcgggaggctccatccacacgtggtgccgcagccggccaacggcgagatc
cgcgtcaagcccacggaatacgtgtcccggcacgccatcgacgggaaattcgtctttgta
gaccagagggcaacagccatcctggcatacttaccccaggaactcctaggtacttcgtgt
tatgaatattttcatcaagatgatatagcacatcttgcagaatgtcacagacaagttttg
cagacaagagaaaaaattacaactaactgctacaagtttaaaataaaagatggctctttt
attacgttgcggagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatac
attgtctccacaaacacagtggtttccaccacggtcctggacagcggggacacggccttt
ccccagctggcagcgtccccacacagcatggacagcgtgctccaggctggggaaggtggc
cccaaaaggacccatcctactgtgcctggaattccaggtggaacaagagctggggcaggt
aaaatagggaggatgattgcagaagaaatcatggagattcacaggataagaggctcgtca
ccttccagctgtggctcgagtcccctgaacatcaccagcacgcccccgcccgacacatcc
tcgccaggagggaagaagatcttgaatggtggcactccagacatttcttcagctgggctg
ctgtctgggcaaatccaggataattccgggtacccgtattccgacaactcctctatcctg
ggggagaactcccacatcggcatggacatgatcgacacggagcagggctccagcagcccc
agcaacgacgaggcggccatggccgtcatcatgagcctgctggaggccgacgccgggctg
ggcgggcccgtggacttcagcgacctgccctggcccttgtaa
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