Sylvia atricapilla (blackcap): 136362301
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Entry
136362301 CDS
T10263
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136362301 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136362301 (NUP160)
03036 Chromosome and associated proteins [BR:
sati03036
]
136362301 (NUP160)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136362301 (NUP160)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136362301 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
136362301
NCBI-ProteinID:
XP_066176794
LinkDB
All DBs
Position
6:10123385..10150291
Genome browser
AA seq
1394 aa
AA seq
DB search
MAAALAARSCLELSAAGRAPPRPPQELLFIPPGISPLPAGRYSDSAGGFCYQESAQLGAA
TRNRWVRWSTSGDTVVLVEESLDVNLLNNAVRLRIQGCPFLPGGIHLCEVQSHLVVLLLT
AQTVHRLLLPHPARLYRSELITESQVQSVFTDISKIHIRDPSNYYVIPSVPGLAPNSVAS
AAWLSSEGEALFALPSASGGIFVLKLPPPDAPGSVSVVELKQSSVVQRFLTGWMPTAIRG
DGGPSDVPVSLSVHCLDHDAFLFALCQDHKLRMWSYKDQMCLMVADLLEFMPVSRDLRLA
AGTGHRLRLAFSQSLGLYLGVYMHAPKRGQFCVFQLVSTESNRYSLDHISSLFSSQETLV
DFALTSAEIWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVTVRQDQDPREIY
LEYIFMPGRFSNAAIQKALQIFSQGTERHMDLTWDELRKEVTLAVENEFQGSVTEYECSP
EEFWQLQVEFWSKFYACCLQYQEALSRPLALHVNPYTSMVCLLKKGSMSFLVPCSLVDHL
YLLSNEHLLTEDDAAIFEDLEMSRDVVCLVQCLRLIGESISMEMAFIMEMACSRLQPPEK
AAEQILEDLIANDTENVMEDIHSKLQEIRNPIHAIGLLIREMDYETDADMDRAPHLALRM
SLSQLFGSGTAAHVVCGGVAKICTVRFLLCRDLLILQQLLLRLGDPMVLGGGQLFQSQQD
LLHRTSPLLLSYFLIRWASQCLASDVPVDTLESNLQHLSVLELADTTALTPHKLVSGPQT
IVELFFQEVARKHIISRLFLQPNTSLAETSLNWPHLITSIVADFLPLLWPSNPSFLFPEC
LMGSCQYTQLQEYIRLLQPWCHVNMGSCCFMMGRCYLVMGEGHKALDCFCQAASEVGREE
FLDRLIQPEEGEVVSTPRLQYYNKVLRLLEMLGLPELVIELATLAIMESADDWRSQATLR
TCIFKHHLDLGHNNEAYVALTQNPDPGRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNE
VVGIIESHARAVDLMTHNYYELLYAFHVYRHNYRKAGTVMFEYGMRLGREVRTLRGLQKQ
GNCFLAAINCLRLIRPEYAWIVQPASGAVYERPGASPKRSHDGECMAVPTTRQIEILELE
DLERECLLARIRLTLVEHDMSAAAVAGNSTPEETVSLLVRAGLFDSAITLCQTFKLPLTP
IFEGLTFKCIKLQLGGEAAQAKAWDWLAANQLSAVVTTKESSATDEAWRLLSSYLERYPS
QNSLYHRCVINKLLAHGIPLPNWLINSYKEVDAAELLRLYLNYDLLEEAVDLVLEYVDAV
LGKGHQYFGIEVPLSPASPTMWLPYTAIDQLLQALRESSASENSVVLYEKLNDKMEDYQQ
KVSVATMERLYCRP
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctctggcggcgcggagctgcctcgagctgagcgcggccggccgggcccct
ccgcgacccccgcaggagctgctgttcataccccccggcatctccccgctccccgccggg
cgctacagcgacagtgccggcggcttctgctaccaagagagcgcgcagctcggggccgcc
accaggaatcgctgggtgcgatggagcacgtcgggggacacggtggtgctggtggaggag
tccctggacgtgaacctgctgaacaacgctgtgcggctgcggatccagggctgcccgttc
ctgccgggcggcatccacctgtgcgaggtgcagagtcacctggtggtgctgctgctcacg
gcgcagacggtgcaccggctgctgctcccgcaccccgcccgcctctaccgcagcgagctg
ataacggagagccaagtgcagtctgtgtttacagatatcagcaaaatccacatcagggat
ccctccaattactacgtgattcccagcgtgccagggctggctcccaactctgtggcctct
gcggcctggctgagcagcgagggggaggctctctttgcccttccctctgcctcaggaggg
atctttgtccttaagctgcctcctcccgatgctcctggaagtgtttctgtcgtggagttg
aagcagagctcggtggtgcagcgtttcctcacgggctggatgccaactgccatcagaggt
gatggcggcccctcggatgttcccgtcagcctctccgtgcactgcctggatcatgacgcc
ttcctctttgctctctgccaggaccataagctccggatgtggtcctacaaggatcagatg
tgcctgatggtggcggatctgctggaattcatgccggtcagcagggacctgcggctggcg
gccggcaccgggcaccgcctgcgcctggccttctcccagtccctgggcctctacctggga
gtctacatgcacgctcccaagagagggcagttttgtgtcttccagctggtgagcactgag
agcaaccgctacagccttgaccacatctcctccctgttctcctcacaggagactctggta
gactttgccttaacctcagctgagatctgggcactgtggcacaacgaggagaaccaaact
gttgtgaaatatatcaactttgagcagaacgttgcaggccagtggaaccaagtatttgtg
cagccactccctgaggaggaggtgacggtccgacaggatcaggaccccagggaaatttac
ttggaatatatcttcatgccaggcaggttcagtaatgcagctatccagaaggctttgcag
atcttttctcaaggaactgagaggcacatggatctgacgtgggatgagttaaggaaagag
gtcaccttagctgtggaaaacgagttccagggcagtgtgacggaatatgagtgctcccca
gaggagttttggcagctgcaggtggaattctggtctaagttctatgcctgctgcctgcag
taccaggaagctctttcccggcccctggccttgcacgtgaacccctacaccagcatggtg
tgcctgctaaagaagggctccatgtccttcctcgtgccgtgctccttggttgatcatctc
tatctcctctccaacgagcacctcctgactgaggatgatgctgccatctttgaagatttg
gagatgtctcgtgatgttgtctgtcttgtccagtgccttcgcctgatcggagaatcaatt
tccatggaaatggcattcatcatggaaatggcttgctcccgcctccagcctccagaaaag
gctgcagagcagatcctggaggacttgatagctaatgacacggaaaatgtgatggaggat
atccacagcaaactgcaggagatcaggaaccccatccatgccattggattgctcatccga
gagatggattacgagacagatgctgacatggacagagctcctcacctggcgctgcgcatg
agcctgtcccagctgtttggcagcggcaccgcggcgcacgtggtgtgcggaggggtggcc
aagatctgcaccgtccgcttcctcctctgccgggacctactcatcctccagcagctcctg
ctgcgcctcggagatcccatggttttgggagggggacagctcttccagtcccagcaggac
ttgctgcaccgcacgtctcccctgctcctgtcttacttcctgatccggtgggcaagccag
tgcctggcctctgatgttcctgtggacacgctggaatctaatctgcagcatctctccgtg
ttggagttagcagacaccacggctctgacaccacacaaactggtgtccggccctcaaaca
attgtggagctcttctttcaggaagtggccagaaaacacatcatatcccgactgttcctg
caaccaaacacctctttggctgagacaagtttgaactggccccaccttatcacctcaata
gtggctgattttctgcctctcctatggcccagcaatcccagcttcctcttcccagagtgc
ctgatgggaagctgtcagtacacccagctccaggaatacatccgactgctgcagccatgg
tgccatgtgaacatgggctcctgctgcttcatgatgggcaggtgctaccttgtcatgggt
gaagggcacaaggctttggattgcttctgccaagctgcctctgaggtgggaagagaggag
ttcctggacaggctgatccagcctgaggagggtgaggtggtctccacgccacgcctgcag
tactacaacaaggttcttcgcttgttggagatgctgggtttgccagagctggtcatcgag
ctggccaccttggccatcatggaatcagcagatgactggagaagccaggctactttaagg
acctgcatcttcaaacatcatttggatttggggcacaataatgaagcctatgtggcctta
acacaaaacccagatccaggcaggcagctggactgcctacgccagctagtggtggttctc
tgtgagcgctcccagctccaggacctggtggaattcccttacgtgaacctgcacaatgag
gttgttgggatcattgagtcccacgctcgggctgtggatctgatgactcacaactactac
gagctgctctacgccttccacgtgtaccggcacaactaccggaaagctggaacagtgatg
tttgagtacggcatgcggctgggcagggaggtgcggacactccgagggctccagaagcag
ggaaattgtttcctggctgccattaactgcctgcggttgatccgcccagaatatgcctgg
atagtgcagccagcctctggagctgtgtacgagcgcccgggagcatccccgaagaggagc
cacgatggggagtgcatggctgttcccaccactcggcagatcgagatcctggagctggag
gatttggagagggaatgtttgctggcgcggatccggctgaccctggtggaacatgacatg
tcggcagcagcagtggcaggcaactccacgcccgaggaaactgtgtccctgctggtccgg
gccgggctcttcgactcggccatcaccctgtgccaaaccttcaagctgcccttgacgccc
atctttgagggcctgaccttcaagtgcatcaagctccagctgggaggggaagcagcacag
gcaaaggcctgggattggctggcagccaaccaactctcagccgtggtcaccaccaaggaa
tccagtgccacagatgaagcctggaggctgctgtcatcctacttggagcgttacccatcc
cagaacagcctgtaccatcgctgcgtcatcaacaagctcctggcacacgggatacctctg
cccaactggctcattaacagctacaaggaagtggatgctgctgaactgctgcgcctgtac
ctgaactacgatctgctggaggaggccgtggatttggtcctggaatatgtggatgctgtg
ctgggcaaagggcaccaatattttgggatcgaggtccctctgtccccagcatcccccacg
atgtggcttccctacactgccattgaccagctgctgcaggcactgcgggagagcagcgcc
agcgagaacagcgttgtgctctacgagaagctgaatgacaagatggaggactaccagcag
aaggtcagcgtggccaccatggagcgcctgtactgccgcccctag
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