Sylvia atricapilla (blackcap): 136362331
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Entry
136362331 CDS
T10263
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136362331 (CTR9)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
136362331 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
136362331
NCBI-ProteinID:
XP_066176836
LinkDB
All DBs
Position
6:complement(10402362..10422517)
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AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatcccgctgcgggataccgacgaggttatcgagcttgac
ttcgatcagctgcccgagggtgatgaagttataagtatactgaaacaggaacacacccag
ctgcacatatggattgccctagcgctggaatactacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgctcgcatcgatggcaacctggactacagagaccacgagaag
gatcagatgacatgtctggacactctggcagcctactatgtacagcaggctcgcaaggag
aagaacaaagacaacaagaaggagctcatcacccaggccaccctgctgtacactatggct
gacaaaatcatcatgtacgatcagaatcacttgttgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcacagttccactttgtgctcaaccagtctcca
aataatattcctgccctacttggtaaggcttgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagccgaggtt
cggttgggaatgggccactgctttgtgaaactgaacaagctggagaaagctcgcttggcc
ttcagcagggctctggagctgaactccaagtgtgtcggggccttggttggactggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactcctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtacaacacttggctcttcatgctttccataacacagag
gtggaagcgatgcaggcagagagctgttatcagctggcaaggtctttccacgtgcaggaa
gactatgatcaagctttccagtactattaccaggctactcagtttgcctcatcttctttc
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctatcccaacaattatgagaccatgaaaatc
cttggatctctttatgcagcttcagaagaccaggagaaacgagatattgcaaaggggcat
ttaaagaaagtcacagaacaatatcctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatatacagggtgctctctcagcctatggaacagccacacgcatt
ctgcaggagaaggtacaggctgatgtccctcccgagatcctgaataatgtaggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcttggcgtcgctggatcgt
gcaaaagcagaggctgagcatgatgagcattactacaatgccatctctgtgacaacatcc
tacaacctcgccaggctctacgaggccatgtgtgaatttcatgaagcagaaaagctctat
aaaaacattttgagggaacatccgaattatgttgattgctacttgcgcttgggagctatg
gccagggataaagggaatttttatgaggcttctgattggtttaaagaagcacttcaaata
aatcaggatcatccagatgcctggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacaaaacgat
acttattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaggaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgctaatggcataggagctgtcttggcacacaaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacatatctacgtagagcagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtgttg
ttatatttggcccgggcactgtttaaatgtggcaaattacaggaatgcaaacaaactttg
ttaaaggccaggcatgtggctccaagtgatacagtcctcatgtttaatgtggctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtgctt
aatgctgtgaaagaactggaactcgctcataggtacttcagttacttgagtaaagtgggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctccgactta
ctgagccaggcccagtatcacgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgctgaaagaacag
gaagagaagcgcctgagagaaaaagaagagcagaagaaacttctggaacaaagagctcaa
tatgtggagaagaccaagaatatcctgatgttcactggtgaagtagaaggatcgaaggag
aaaaaacgtggtggaggtggaggcaggcgttccaaaaaaggagcaggggagtttgatgag
tttgtcaatgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagaagaggggagtgatgatgaagaacatgagaacggcccacgt
cctaaaaagcgacgtccacccaaagcagagaagaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgacgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacgctagaaacagcaacagtgat
tctgaggacggggagcagcagcacagcaagcgcattgtttccgacagcgactccgataac
aggaacaagtctggcagcgaggcaggcagtccccgcaggtccagcgcccgcgcgtccgag
gaggagtctgacagtgacaggtcccccaggaagaggcggcgctcggagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgagtcg
cgcccggcttcgcgcagcgccgagtccgacagagactccgagaggggctctgaccacgag
ggctctgccagagcttctgggaacgagtcggagccagaggcatccaatgatgagggctct
gaagggggctcagatgacagcgattag
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integrated database retrieval system
