Sylvia atricapilla (blackcap): 136362454
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Entry
136362454 CDS
T10263
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04620
Toll-like receptor signaling pathway
sati04621
NOD-like receptor signaling pathway
sati04622
RIG-I-like receptor signaling pathway
sati04623
Cytosolic DNA-sensing pathway
sati05164
Influenza A
sati05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
136362454 (IRF7)
04621 NOD-like receptor signaling pathway
136362454 (IRF7)
04622 RIG-I-like receptor signaling pathway
136362454 (IRF7)
04623 Cytosolic DNA-sensing pathway
136362454 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
136362454 (IRF7)
05168 Herpes simplex virus 1 infection
136362454 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136362454 (IRF7)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
136362454 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
136362454
NCBI-ProteinID:
XP_066177080
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Position
6:17879629..17883453
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AA seq
507 aa
AA seq
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MAAPEEGEAQKMRFGQWLLNAINSGRYPGLHWIDSAHTVFSVPWKHNARKDISSSDVEVF
KAWAKVSGRYEEGSEDPAKWKTNFRCALRSTHMFNLEEDNSKRGDDPHKVFSVVSANLHH
SKEGDSSISNPVVDQQAAQQQLQLELHPRDMASEIAMPGNTDSTQLSILEDLLKQCDISP
DLGPLAPTCMPAGGFPAGDTSHQDTLLQPYADTSQNGCFAPTTFPEWVTTVEQPALDTYQ
PTGLMPPEDTGAMPTPCHLMEGTVSMEYAAEQALFMPATNPVPQPRLLLDNADGTFSILD
VTIYYRGREFHREVVVSSRCLLTYQAPSLPEAPCPWHVVQFPSPASVADSKQRRMTEELL
GVAGLQLEQRAHKVFATRWEKCRVFWALSQQLEGVEEPPPNLLCRDQETLIFDYNEFCTE
LRDFRNGQRRRSPDFTIYLCFGQAFSKDKPKESKLILVKLVPRFCQYCYEQVLQEGASSL
DSHTISLQLSNSFDLMELIEQYNMQLG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccggaggagggggaagcccagaagatgcggttcggacagtggctgctgaac
gccatcaacagcgggaggtacccggggctgcactggatcgactctgctcacactgtcttc
agcgtcccctggaagcacaacgccaggaaggacatcagcagcagtgacgtggaggtcttc
aaggcctgggcaaaggtcagtgggaggtatgaggaaggctccgaggacccggccaagtgg
aagaccaacttccgctgtgccctgagaagcacccacatgttcaacctggaagaggacaat
tccaagcgtggtgatgacccccacaaggtcttctccgttgtctcagccaacctccaccac
agcaaggagggagattccagcatctcaaaccctgtggtggaccagcaggcagcacaacag
cagctgcagctggagctccacccccgagacatggcctcagaaattgctatgccaggcaac
accgactccacacagctctcaattctggaggacctgctgaagcagtgtgacatctctccc
gaccttggcccactggccccaacctgcatgcctgcaggtggttttcctgcaggggacact
tcccaccaggacaccctgctccagccttatgcggacaccagccaaaacggctgcttcgct
cccacaacattcccagagtgggtgaccacggtggagcagccagccttggacacctaccaa
ccaacgggcctcatgccacctgaggacacaggggccatgccaacgccgtgccacctgatg
gagggcacggtctccatggagtacgcggcagagcaggcattgttcatgcccgctaccaac
cctgtgccacagccacggctgctgctggataacgcagatggcaccttctccatcctggat
gtcaccatctactaccggggcagggagttccaccgggaggtggttgtcagcagccgctgc
ctgctgacctaccaggcccccagtctgccggaggccccgtgcccctggcacgtggtgcag
ttccccagcccagccagcgtggccgacagcaaacagcggcgcatgactgaggagctgctg
ggcgtcgcggggctgcagctggagcaacgcgcccacaaggtctttgccactcgctgggag
aagtgcagggtcttctgggccttgtcccagcagcttgagggggttgaggagcccccaccc
aacctgctctgccgggaccaggaaacgctcatctttgactacaatgagttttgcacagag
ctgagggacttccgcaacggccaaaggcggcgatcccctgacttcaccatctacctctgc
tttgggcaggccttctccaaggacaagcctaaggagtccaagctcatcctggtcaagctg
gtgcccaggttctgccagtactgctacgagcaggtgctgcaggagggagcctcctccctg
gacagccacaccatcagcctgcagctctccaactccttcgacctcatggagctcatcgag
cagtacaacatgcagctgggctga
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