Sylvia atricapilla (blackcap): 136362484
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Entry
136362484 CDS
T10263
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04514
Cell adhesion molecule (CAM) interaction
sati04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136362484 (LRRC4C)
04517 IgSF CAM signaling
136362484 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136362484 (LRRC4C)
Cell adhesion molecules [BR:
sati04515
]
Immunoglobulin superfamily
NGL family
136362484 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
ig
Ig_3
LRR_1
LRR_14
V-set
LRR_9
Ig_2
VEGFR1-3_N_Ig-like
Ig_6
Sp38
DUF6715
Ig_MYOM1
Syndecan
Motif
Other DBs
NCBI-GeneID:
136362484
NCBI-ProteinID:
XP_066177144
UniProt:
A0A7K7EEF4
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Position
6:complement(20616547..20711627)
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AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETINMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcagcttcttgtggtggctggt
ctagtgagggcccaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaggtg
atctgtgtacggaaaaatcttagagacgtgccagacggcatctccaccaacacccggcta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaaacatctgagg
cacctagaaatcctgcagctcagcaggaatcacatcagaacaattgaaataggggctttc
aatggtctggccaatctcaacactttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctatcaaaactgaaggaactgtggttgaggaacaaccccatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggttggatttgggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagattcctaaccttactccacttgtaaaa
ctggatgaattagatctttctgggaatcatctgactgccatccggccaggttctttccaa
gggttaatgcatcttcaaaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataaccttcagtcacttgtagagatcaacctggcacacaacaatctaaca
ctactgcctcatgacctgttcacaccgctccgcctggaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcacct
tccaatactgcatgctgtgcccgttgccacacgcctcccagtttaaaaggaaggtacatt
ggagagctggacctgaattacttcacatgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagagatgaaatgccgggcatcgacctccctg
acctccgtatcttggattactccaaatggatctgtaatgacgcatggcgcatacagagtt
cggattgctgtgctcagcgacggcacattaaattttacaaaggtaactgtgcaagacacg
ggtttgtacacatgcatggtgagtaactctgttgggaataccacggcttctgccacgctg
aatgtgaccgccctggataaccctggttacacgtacttctcgaccgtcacggtagagact
gtggaaccttctcaggatgaggcacagaccacagagcaggttgggcccacaccagttacc
aactgggaaaccattaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacgttcaccattcctgtgacggacgcaaacaacgggatcccaggaatagatgaggtt
atgaagactaccaaaatcataattggttgttttgtggctatcactctcatggctgctgta
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacccatagag
agtcatttgcccatgccagcaatagagcatgagcacttaaatcactataactcttataaa
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgttcaagagactcaaatctaa
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