Sylvia atricapilla (blackcap): 136362580 Help Entry 136362580         CDS       T10263                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism sati  Sylvia atricapilla (blackcap) Pathway sati04140   Autophagy - animal sati04148   Efferocytosis sati05132   Salmonella infection Brite KEGG Orthology (KO) [BR:sati00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     136362580 (VPS39)    04148 Efferocytosis     136362580 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     136362580 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sati04131]     136362580 (VPS39) Membrane trafficking [BR:sati04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     136362580 (VPS39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Lgl_C SAM_CEP-1_C EcoR124_C Motif Other DBs NCBI-GeneID:  136362580 NCBI-ProteinID:  XP_066177346 LinkDB All DBs Position 6:complement(26303872..26326339) Genome browser AA seq 875 aa AA seqDB search MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDVGCNRFEVTLEKSNK NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTISKAKGASLFTCDLQQSDTGE EVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD GKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSI ATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAK LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKL NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL HLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLAIPYLEHIIHVW EETGADFHNCLIQLYCEKVQGLMKEYLSSFPADRAPVPAGEEGGDLGDYRKKLLLFLEKS SWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNK DGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLL PANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV CTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgccttcgagcatgtgccgatcctggagaagctgccgctgcagatcgactgc ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttctgctttac aggatcaagaaagatgtaggttgcaataggtttgaagtgacactagagaaatccaacaag aacttctcaaagaagattcaacagatccatgttgtttctcaatttaaaattttggtcagt ctattagaaaataacatttacgtccatgacctgttgacatttcaacaaatcaccacaatt tccaaggcaaaaggtgcatctctcttcacttgtgatctccagcaatcagatacaggggaa gaggtgctgaggatgtgtgtggcggtgcgtaagaagctacagctttatttctggaaggac agagagttccatgaactacagggggacttcagtgtacctgatgtacccaagtctatggcc tggtgtgaaaactccatctgtgtaggcttcaagagggactattacctgatacgggtggat ggaaaaggatccatcaaagaactgtttcccacagggaagcaactggaaccattggtagct cctgtagcagatggaaaagttgcagttggccaagatgatctaacagttgtgcttaatgaa gaaggagtctgtactcagaaatgtgccttgaattggacagatattcctatagccatggag caccagcctccctacatcattgctgttctgccaaggtacgtggagatccgcacttttgaa ccccggctgctggtgcagagcatcgagctgcagaggccacgcttcatcacctctggaggc acaaacattatatatgtggcaagtaatcactttgtttggaggctcattccagtgtccata gccacacagatccagcagcttctgcaggacaaacagtttgagctggctttgcagttggca gaaatgaaagatgattccgatagtgagaagcgacaacaaattcaccacataaagaacctc tttgccttcaaccttttctgccagaagcgttttgatgaatccatgcaagtttttgccaag cttggtacagatcccactcatgtgatgggtctgtatcctgacctcctgcccacagattac aggaaacagctgcagtatcccaaccccctgccagggctctctggggcagagctggagaag gcacatttagctctgatagactacctaactcaaaaaaggagtcagctagtgaagaagcta aatgattctgatcatcagtccagtacctcacctctcatggaaggaacacccacgatcaaa tccaaaaagaagctgctgcaaatcattgataccaccctgttaaagtgttacctgcataca aatgtagcactggtggcaccactgctgcgtctggagaacaaccactgccatattgaggag agtgagcatgtgctaaagaaggcacacaaatatagtgagctgataatactgtatgagaaa aaaggtctgcatgagaaagcattacaggtactggtggatcagtcaaagaaagctaactca cctttgaagggtcatgagaggacagtgcaatatctgcagcatttgggcacagagaacttg cacttggtattttcctactctgtctgggtgctaagagattttcctgaagatggactgaag atatttacagaagacctccctgaagtagaagctttgccacgagacaaagtgctcagtttc ttgatagagaattttaaaagcttggctattccttacctggaacacatcattcatgtctgg gaagaaaccggtgcggactttcacaactgcctgatccagctgtactgtgagaaagtacag ggcttaatgaaagaatatctcagttctttccctgcagatagagctccggtgcctgctggg gaggaaggaggagacttgggggattaccggaaaaagctgctgctttttctggagaagtct agctggtatgaacctagtcgacttattagtgacttcccctttgatggtctcctagaggaa cgtgctctgctcttgggtcgtatggggaagcatgagcaagctctgtttatttatgttcat attttgaaggacaccaacatggctgaaaactactgccataaacattatgacagaaacaaa gatggcaacaaagatgtgtatctgtccctgctccgcatgtatctctccccacccagtgtt cattgcttgggaccaatcaagatggaggtgctggagccccaagccaatctgcaagctgct ctgcaggttttggaactgcaccacagcaaactggataccactaaggcaataaacctactc ccagcaaatacacagattagtgagattcgcatcttcttagagaaagtacttgaagaaaat gctcagaaaaaaagatttaatcaagtgctcaagaatcttctccatgcagaatttctgagg gtccaggaggagcggatcttgcatcagcaagtaaagtgcattattacagaggagaaggtg tgcactgtttgcaaaaagaagataggtaacagtgcatttgctcgataccctaatgcaata gtcgtgcattatttctgctccaaagaagtcaacacactggacacctga

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