Sylvia atricapilla (blackcap): 136362653
Help
Entry
136362653 CDS
T10263
Symbol
VTI1B
Name
(RefSeq) LOW QUALITY PROTEIN: vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
136362653 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136362653 (VTI1B)
Membrane trafficking [BR:
sati04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
136362653 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
WXG100
Fusion_gly
DUF4407
DUF3958
OmpH
Motif
Other DBs
NCBI-GeneID:
136362653
NCBI-ProteinID:
XP_066177483
LinkDB
All DBs
Position
6:complement(30077426..30090768)
Genome browser
AA seq
354 aa
AA seq
DB search
MSVETAQRRLSIVVFETHFYNLTPRLMSLTLARGLQRHTRGRAPRPGSSSVAAAAAAGPA
GTGEPQXGAAGPGRSVVAAEERPRAVRAXGPRDYSSQQAVREAAPAAEAPGGQGQGRGGC
GAMAGRGSASSEHLERLHDIFRGLHGDLRGVPERLRGSAAEERKKLAREFDEKQREANET
LREMEEELKYAPVPFRNQMMSKIRAYRRDLSMFQREMRSTDLGLGRGNQGDTKYGIFATE
NEQSTNLQSQRVLLLQGTDSLNRASESIERSHRIAAETDQIGTDIIEELGEQREQLERTK
SRLVNTSENLSKSRKILRSMSRRVTTNKLLLSIIIILELAILGGVVYFKFFRKK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagagacagcgcagcggcggctgtcgatagtggtgtttgaaacacatttttac
aacctcacgccgaggttgatgtcattaaccctggcaaggggcttgcaacggcatacacgt
gggcgggcgccgaggcctggaagcagctcggtggcggctgcggcagcggcgggtcccgcc
ggtaccggggagccgcagnncggcgctgccggcccggggcgctccgtggtggcggcggag
gagcgcccccgcgcggtgcgggctnncggcccccgggactacagctcccagcaggcagtg
cgcgaggcggccccggcggcggaagcgccgggcgggcagggccaggggcgcggcggctgc
ggggccatggccggccgcgggtccgcgtcctcggagcacctggagcggctgcacgacatc
ttccgcgggctgcacggagacctgcggggcgtccccgagcggctgcggggcagcgcggcc
gaggagaggaaaaaactggctcgagaattcgatgagaagcagcgtgaagccaatgagacg
ctgcgggaaatggaggaagaactgaagtatgctcctgtgcctttccgcaaccaaatgatg
agcaaaatccgagcctacagaagagacctgtccatgttccagagagagatgagaagcaca
gatctgggattgggccgtggaaaccaaggcgataccaaatatggaatctttgccacagaa
aacgaacagagtactaacctgcagtcacagagggtgctgcttctgcagggcacagacagt
ctgaaccgagccagcgagagcatcgagcgctcgcaccgaatcgctgcagagaccgaccag
attggcacggacatcatcgaggagctgggggagcagcgggagcagctggagcgcaccaag
agcaggctggtgaatacaagtgagaacttgagcaagagtcgtaagattctccgctccatg
tcccggagagtaaccacaaataagttgttgctgtcaattatcatcatcttggaactggcc
atcctaggaggtgtggtctacttcaagttcttccgcaagaaatga
DBGET
integrated database retrieval system
