KEGG   Sylvia atricapilla (blackcap): 136362656
Entry
136362656         CDS       T10263                                 
Symbol
PALS1
Name
(RefSeq) protein PALS1
  KO
K06091  MAGUK p55 subfamily member 5
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sati00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    136362656 (PALS1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sati04990]
    136362656 (PALS1)
Domain-containing proteins not elsewhere classified [BR:sati04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   136362656 (PALS1)
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ SH3_2 L27 PDZ_6 SH3_1 PDZ_2 SH3_9 MMR_HSR1
Other DBs
NCBI-GeneID: 136362656
NCBI-ProteinID: XP_066177487
LinkDB
Position
6:complement(30190604..30246622)
AA seq 675 aa
MTTSHMNGHITEDSDNEAKNVDLVSPEEPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDIRRRREEEGRKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYTVK
TLEVEELLNSLKHIQHILVDPQSQEDISLILQLVQNSDFQNAFKIHNAVTVHMNKASPPY
PLSSNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPMTDE
KIYENVGMYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFASAVPHTTRSRRETEVAGRDYHFVSRQAFESDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgacaacttctcatatgaatggacatatcacagaggattctgacaatgaagcaaaaaat
gtggatctcgtgtcccctgaggaacctcagaagcacagagaaatggctgttgattgccct
ggggacctgggctccaggatgatgcccatgcggcgcagtgctcagctggagcgaatccgt
cagcagcaggaggacataaggcgcagacgagaggaagaaggaaggaaacaagaactggac
cttactgcttccatgaggctaaagaaactagcacaaattcctcctaaaactggaatagat
aatccaatatttgacactgaagaagggattgttttggagagtcctcattacactgtgaaa
acactagaagtggaagaactgttaaattctcttaagcatatccagcacattttggtagac
cctcagagtcaagaggatatctcactcatcttacagcttgttcaaaacagtgattttcag
aatgcatttaagatccacaacgctgttacagtgcacatgaacaaagccagccctccatat
cctctcagctccaatgcacaagaactagcacaagaggtacagagtgttttgaaacccagc
caccataaggatggacaggagcttaatgctttgctgaatgcccctcacatgcaggcactt
ctactggctcatgataaggttgcagaacaagaaatgcagccagagcctatgacagatgaa
aagatttatgagaatgttggcatgtatggaggggagacggttaaaatagttcgcattgag
aaagctcgggatattcccttgggtgctactgttcgcaatgaaatggattctgttatcatc
agtcgaatagtcaaaggaggtgctgcagagaagagtgggctgttacatgaaggggatgaa
gttttggagatcaatggcattgagatccgtggaaaagatgttaatgaagtttttgatttg
ctggctgacatgcatggtactctgaccttcgtattgattcccagtcagcagagcaagcca
cctcctgcgaaggagacagttatacacgtcaaagcgcacttcgactacgatccctctgat
gacccttacgtcccctgccgagagttaggcctgtctttccaaaaaggggacatactccat
gtgatcagtcaagaggatccaaactggtggcaggcttacagagatggagatgaggataat
cagccattggcaggccttattcctggaaaaagttttcagcaacaaagagaagcaatgaag
caaaccatagaagaagacaaggagcctgaaaaatcaggaaaactctggtgtgcgaagaaa
aacaaaaagaaacggaaaaaggttctgtacaatgcaaataaaaatgatgattatgacaat
gaggaaattttgacctatgaggaaatgtcactgtaccatcagccagcaaataggaaacgt
cccatcgttctgatcggcccccagaactgcggccagaacgagctgcggcagcggctgatg
aataacgaagtggatcgctttgcctccgccgtgccccatactactcggagtaggcgagag
actgaagtagctggcagggattatcatttcgtctcccgccaggcatttgagagtgacata
gctgcagggaagttcattgaatacggagagtttgagaagaacctctacggtaccagcata
gactccgtgcggcaagtcatcaactcgggcaagatatgtcttttaaaccttcatacccag
tcactgaaaacactacgtaactctgacttgaagccatatattatatttgttgcaccacct
tcacaagagcgactacgtgctttattggccaaagaagggaaaaatcctaagccagaagag
ctgagagaaatcatagagaagacaagggagatggaacagaacaatggccactacttcgat
acagcaattgtgaattctgatcttgataaggcgtatcaagagttgcttcggttaataaat
aagctcgacacagaaccccagtgggtgccctccacctggctgcgatga

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