Sylvia atricapilla (blackcap): 136362656
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Entry
136362656 CDS
T10263
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
136362656 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sati04990
]
136362656 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
sati04990
]
PDZ domain-containing proteins
MAGUK family proteins
136362656 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
136362656
NCBI-ProteinID:
XP_066177487
LinkDB
All DBs
Position
6:complement(30190604..30246622)
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AA seq
675 aa
AA seq
DB search
MTTSHMNGHITEDSDNEAKNVDLVSPEEPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDIRRRREEEGRKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYTVK
TLEVEELLNSLKHIQHILVDPQSQEDISLILQLVQNSDFQNAFKIHNAVTVHMNKASPPY
PLSSNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPMTDE
KIYENVGMYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFASAVPHTTRSRRETEVAGRDYHFVSRQAFESDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacatatcacagaggattctgacaatgaagcaaaaaat
gtggatctcgtgtcccctgaggaacctcagaagcacagagaaatggctgttgattgccct
ggggacctgggctccaggatgatgcccatgcggcgcagtgctcagctggagcgaatccgt
cagcagcaggaggacataaggcgcagacgagaggaagaaggaaggaaacaagaactggac
cttactgcttccatgaggctaaagaaactagcacaaattcctcctaaaactggaatagat
aatccaatatttgacactgaagaagggattgttttggagagtcctcattacactgtgaaa
acactagaagtggaagaactgttaaattctcttaagcatatccagcacattttggtagac
cctcagagtcaagaggatatctcactcatcttacagcttgttcaaaacagtgattttcag
aatgcatttaagatccacaacgctgttacagtgcacatgaacaaagccagccctccatat
cctctcagctccaatgcacaagaactagcacaagaggtacagagtgttttgaaacccagc
caccataaggatggacaggagcttaatgctttgctgaatgcccctcacatgcaggcactt
ctactggctcatgataaggttgcagaacaagaaatgcagccagagcctatgacagatgaa
aagatttatgagaatgttggcatgtatggaggggagacggttaaaatagttcgcattgag
aaagctcgggatattcccttgggtgctactgttcgcaatgaaatggattctgttatcatc
agtcgaatagtcaaaggaggtgctgcagagaagagtgggctgttacatgaaggggatgaa
gttttggagatcaatggcattgagatccgtggaaaagatgttaatgaagtttttgatttg
ctggctgacatgcatggtactctgaccttcgtattgattcccagtcagcagagcaagcca
cctcctgcgaaggagacagttatacacgtcaaagcgcacttcgactacgatccctctgat
gacccttacgtcccctgccgagagttaggcctgtctttccaaaaaggggacatactccat
gtgatcagtcaagaggatccaaactggtggcaggcttacagagatggagatgaggataat
cagccattggcaggccttattcctggaaaaagttttcagcaacaaagagaagcaatgaag
caaaccatagaagaagacaaggagcctgaaaaatcaggaaaactctggtgtgcgaagaaa
aacaaaaagaaacggaaaaaggttctgtacaatgcaaataaaaatgatgattatgacaat
gaggaaattttgacctatgaggaaatgtcactgtaccatcagccagcaaataggaaacgt
cccatcgttctgatcggcccccagaactgcggccagaacgagctgcggcagcggctgatg
aataacgaagtggatcgctttgcctccgccgtgccccatactactcggagtaggcgagag
actgaagtagctggcagggattatcatttcgtctcccgccaggcatttgagagtgacata
gctgcagggaagttcattgaatacggagagtttgagaagaacctctacggtaccagcata
gactccgtgcggcaagtcatcaactcgggcaagatatgtcttttaaaccttcatacccag
tcactgaaaacactacgtaactctgacttgaagccatatattatatttgttgcaccacct
tcacaagagcgactacgtgctttattggccaaagaagggaaaaatcctaagccagaagag
ctgagagaaatcatagagaagacaagggagatggaacagaacaatggccactacttcgat
acagcaattgtgaattctgatcttgataaggcgtatcaagagttgcttcggttaataaat
aagctcgacacagaaccccagtgggtgccctccacctggctgcgatga
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