Sylvia atricapilla (blackcap): 136362704
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Entry
136362704 CDS
T10263
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
sati Sylvia atricapilla (blackcap)
Brite
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
136362704 (PRPF39)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
Mad3_BUB1_I
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
136362704
NCBI-ProteinID:
XP_066177567
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All DBs
Position
6:34919066..34934816
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AA seq
666 aa
AA seq
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MENAESTEEEQPTVGNESAEPGAESAPEEQHMDFSTEIMSVTEMEQSPDSSPDLNEDNTQ
ESEIPNIESLQTTDIEADFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQENHLPAARKAF
DRFFSHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLD
PADPETNSTIRGAYEHAVLAAGTDFRSDRLWEMYINWENDQGNLREVTSIYDRILGIPTQ
LYSHHFQRFKEHIQNNLPRDFLTTEQFVQLRRELAAASGHSGEDGDELPCGTEDITDPAK
LITEIENMRHRIIEIHQEIFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKIQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMIRLRRVSLERRHGNMEEAEQLLEDA
VRNAKSISEASFYAIKLARHLFKVQKNLPKARKVLSEAIELDKENTKLYLNLLEMEYSGD
LKQNEENILSCFDKAVHGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQALLKEQ
ETLKRRAENGSEEPDEKKLLTDEAGLASAQLMDGDMQVNQAAYNYNAWYQYNYQNAWNYG
QYYHTT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcggagagcacggaggaggagcagcccactgtgggcaatgagagtgccgag
ccaggcgccgagagtgcgcctgaggagcagcacatggacttcagcaccgagatcatgagt
gtcaccgagatggagcagtccccggacagctccccagacctcaacgaggacaacacgcag
gagagtgaaattccaaacattgagagcttacagaccacagatatcgaggctgacttccct
ccggattttgataagttttggaaagtagtagaggacaatccgcaggatttcacaggatgg
gtttatctactgcagtacgtagagcaggagaaccacttgccagcagccaggaaagccttt
gacaggtttttctcacactacccctactgctatgggtactggaagaaatatgcagacctg
gagaagcgccacgacaatgtcaagcagtcagacgaggtctatcgccgagggcttcaggca
attcctcttagtgttgatctttggatacattatataaacttcctaaaagagaccttggac
cctgctgatccagaaactaacagtaccatccggggagcatatgaacatgcagtgctggct
gctgggacagatttccgttctgacagactctgggaaatgtatataaactgggaaaatgac
cagggaaacctaagggaagtgacatccatctatgaccgcatcctgggcatcccaacgcag
ctctacagccatcacttccagaggtttaaagagcacatccagaacaacctgccccgagac
ttcctgaccacggagcagtttgtgcagctgcgccgggagctggcggccgccagtggccac
agcggcgaggatggggacgagctgccctgtggcaccgaggacatcaccgaccccgccaag
ctgatcactgagatagagaacatgaggcacagaatcattgagatccaccaggagatattt
aaccacaacgagcatgaagtcagtaagaggtggacatttgaggaagcgatcaagaggcct
tactttcatgtaaaacctctggagaaaattcagctgaaaaactggaaagagtacttagag
tttgagatagagaatggcactcacgagcgagtcgtggtcctctttgagagatgtgtcatt
tcatgtgccctctatgaggacttctggatcaagtatgccaaatacatggagaaccacagc
atcgagggcgtgaggcacgtgtacagcagggcctgcaccatccatctgcccaagaagccc
atggtgcacatgctgtgggcagccttcgaggagcagcagggcaacattgatgaagccaga
aggatcctgaagacatttgaggagtgcatcctggggctggccatgatccgcctgcgcagg
gtgagcctggagcgccgccatggcaacatggaggaggcagagcagttgctggaagatgct
gtcaggaatgccaagtccatcagtgaagcctccttctatgccatcaaactcgccaggcac
ctcttcaaagtgcagaaaaacctgccaaaggcaagaaaagtgctgtcagaagccatagaa
ctggacaaagaaaacaccaaactgtacctgaacctgctggagatggagtacagtggtgac
ctcaagcagaacgaggagaacatcctgagctgctttgacaaggctgtccatggggccttg
tccatcaaaatgaggatcacgttctcacagagaaaagtggaattcctggaagattttggg
tctgatgtgaacaagctcctggatgcctacgacgagcaccaggcactgctgaaggagcag
gagacactgaagcggcgggcagagaacggctcggaggagccggatgagaagaagctgctg
acggacgaggcggggctggcgtcggcgcagctcatggacggggacatgcaggtcaaccag
gccgcctacaactacaatgcctggtaccagtacaactaccagaacgcctggaattatgga
cagtattaccacacaacctga
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