Sylvia atricapilla (blackcap): 136362726
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Entry
136362726 CDS
T10263
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1 isoform X1
KO
K16682
LIM domain-containing protein
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136362726 (LIMD1)
03036 Chromosome and associated proteins [BR:
sati03036
]
136362726 (LIMD1)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136362726 (LIMD1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
136362726 (LIMD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
136362726
NCBI-ProteinID:
XP_066177607
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All DBs
Position
1:45863984..45896550
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AA seq
589 aa
AA seq
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MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKAAGNNPEFEETRRVFATKMAKIHLQQQ
QQEEMLMAAMNGGAAAFHPPRSSPPVARGSKPPPAAEGPRARPCEGGERGFGGSGARAEA
PGSQAGRRGWEEEPDRIPRVGGPQPGAGRGEPQAGSPGEPQPCRGGQENGGEGRRGAGGR
DPVPPGQRSSFSNAGTPPAPSAGPEEPPPQQRSSSFSAPSAQPARGFSGSAEPCGPKAGG
DGSQPWYQGVSLSFPPGSAPAAPSVEYQHAAAYPSPAGHFVAHGQNHRPTGGSGNPEPGS
SRLASRGTVAPNAPQMLFPEGVSGTRSDSGHLDGSSAAKVKLPCQTLLPQPEQGPSAAEL
KLEALTQRLEQEMDARPKADYFGTCVKCNKGVYGANQACQAMGNLYHDSCFTCGACSRKL
RGKAFYFVNGKVFCEEDFLYSGFQQSADRCFICGHLIMDMILQALGKSYHPGCFRCVICN
ECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDYHVEC
YHCEDCGMELNDEDGHRCYPLDEHLLCHSCHLKHIENGTTPAAAYQHHY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggataagtacgacgatctgggtctggaagctagcaagttcatcgaggacctcaacatg
tacgaggcctccaaggacggtctctttcgggtggacaaagctgccggcaacaaccccgag
ttcgaggagaccaggcgggtgttcgccaccaagatggccaagatccacctccagcagcag
cagcaggaggagatgctgatggcggcgatgaacggaggggccgccgccttccatcccccc
cgtagcagcccgccggtggctcggggttcgaagccgccccccgccgccgaggggccgcgg
gcgaggccctgcgagggaggggagcggggcttcggagggagcggcgcacgtgccgaggcc
ccggggagccaggccgggcgccggggctgggaagaggagcccgacaggattccccgagtg
gggggcccacagcccggcgcggggcgcggggagccgcaggctgggagccccggcgagccc
cagccctgccgcggcgggcaggaaaacggtggcgagggcaggcggggtgccgggggccgt
gacccggtgccacctggacagaggtcctccttctcaaacgccgggacccccccggcacct
tcagcggggccagaggagcccccgccacagcagagatcctcatccttctcggcaccctca
gcgcagcccgctcgagggttttcaggctccgctgagccctgcggtcccaaagccggagga
gacggcagccagccgtggtaccagggtgtctcgctgtccttcccaccaggctccgcaccc
gctgctcccagcgtggaataccagcacgccgcggcctaccccagcccagccggtcacttc
gtggcccatggtcagaaccacaggcccaccggcggcagcgggaaccctgaaccgggctcc
tcacgcctggcctcgcgggggaccgtggctcccaatgcgccgcagatgcttttcccggag
ggcgtgagcgggacgcggtcagactctgggcacttggatggctccagcgcagcgaaggtg
aagctgccctgccagaccctccttccgcagccagagcaagggccgtcggcggccgagctg
aagctggaggcactgacccagcgcctggagcaggagatggatgctcggccaaaggccgat
tactttggtacctgtgtgaagtgcaacaagggcgtgtatggagccaaccaggcttgccag
gccatgggcaacctctaccatgacagctgcttcacctgtggagcctgcagtcgaaagctg
agaggaaaagccttttattttgtcaatggaaaggtgttctgtgaagaagacttcctgtat
tctggtttccagcagtcggctgacaggtgtttcatttgtggtcatttgataatggacatg
atcctgcaggctctagggaaatcatatcatccgggctgcttccgatgcgtcatctgcaac
gagtgtctggatggtgtgccattcactgtagactctgaaaacaaaatctactgtgtcaga
gattaccacaaagttttagctccaaagtgcgcagcgtgtggacttcccattctgccctct
gaggggtctgatgagaccattcgggttgtgtccatggacaaggattaccatgtggaatgt
tatcactgtgaggactgtgggatggaactgaacgacgaagacggacatcgctgctaccca
ctggatgaacatttgctttgtcactcctgtcacctgaaacacatagagaatggcacaacc
ccagcagctgcctaccagcaccactactag
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