Sylvia atricapilla (blackcap): 136362747
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Entry
136362747 CDS
T10263
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136362747 (WDHD1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
136362747 (WDHD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Ctf4_C
WD40
Beta-prop_WDR3_1st
WD40_Prp19
HMG_WDHD1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_WDR19_1st
HMG_box
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_EML
DSE1_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
Beta-prop_VPS8
ASA1
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_WDR75_2nd
HMG_box_2
KNTC1_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
136362747
NCBI-ProteinID:
XP_066177637
LinkDB
All DBs
Position
6:complement(37334896..37361637)
Genome browser
AA seq
1126 aa
AA seq
DB search
MPSMQKPMRYGHTEGHTDVFFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAFSC
ALKNGKLVTAVSNNTVQIHTFPEGAPDGILTRFTMHANHLTFSPDGTRVAAGSSDFMIKV
VEVTDSSKQKTFRGHDAPVLSLSFDPKDVYLASASCDGSVRVWNLADQTCTTSWLLLQKC
NDVINAKSICRLAWQPGTGKLLAVPVDKVVELFRRETWDSQFNLSDASITQPLNVVVWSP
CGQFLAAGSVDGNIVVWNVETQQCIERMKHEKKYSICGLAWHPKYKQIAYTDTEGNLGLL
ENVGDVEKPNDKVASAVAKDYNDLFDGDDDDYLNGDMVEPPSSPKTGDNEDDADELVQPP
GHVRRAVIDDDDDNSLDIGLIKAGSGLLEKEDYGDDQTGGFSALPPSSTQQPLYDGPMPT
PRQKPFQSGSTPVHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSVHHATHLPNSLSH
TMADLSAEAILLACESTEELASKLHCIHFGSWDTNKEWTVDMPKDEEIEAICLGQGWAAC
ATTALLVRVFTVGGVQKEIFSLPGPVVAMAGHGEQLMVVYHRGTGFDGDQCLGVQLMELG
MKKRQILHGDPLSLTRRSYLMWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNTREH
CKGKYDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILPFKLPYCQVATEKGQMEE
QYWRSILFHGHVDYLSKNGYEFDENAKNQVVKEQQELLMKLFALSCKLEREFRCVELADL
MTPSVVNLAIKYSSRSRRLNLAQRLSEVAVEKASELAAAAQEHEEEEEAFQHHSNAGYSR
SATNWGQLPGRNVQQDEEVENAEETDACEEAEETPEVQQEKEPDHFSKGVTSAEVITPKS
ALVASSSRGRVNPFKVSSSKKDPVVPSANILDNMTKYSKKTSLLGSRAVNKQNPPVIKPL
TPKPKTKQALAASFFQPRTPATNPAEKTVEEREEKAGNESQEVKVTAQENTENRRPMTGF
QMWLKENRTNILTDNPDLNEAEVIKEGMSRFRMLTSEERMVWTEKAKGGRVDDSAEDKKR
KRPTAEEDEVENSQEQNSKDTNVSKKSKPLDASTNNRLSAFAFKQS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaatgcagaagccgatgcggtacggccacactgaggggcacactgacgtcttc
tttgatgacaccggcagctgcattgtgacttgtggcagtgatggagatgttaggatttgg
gagaacctggatgatgatgatccaaagtccattaatgtgggagaaaaggccttctcgtgt
gctctgaagaatggaaagctggtcacagcagtgtccaacaacactgtccagatccacaca
tttcctgagggagctccggatgggatcctcactcgtttcaccatgcacgccaaccacctc
acctttagtcctgatggcaccagagttgctgctggatccagtgactttatgatcaaagtt
gtggaggtgactgatagcagcaagcagaaaacgttccgaggacacgatgctcctgtttta
agcctgtcttttgaccccaaggatgtttacctggcctcagcgagctgtgacggttctgtc
agagtctggaaccttgcagatcagacatgcacaacaagctggctgctgctgcagaaatgt
aatgatgtgataaatgctaaatcaatctgcaggcttgcctggcaacctggaactggcaag
ctgctggcagttcctgtagataaagttgttgaactgttcagaagagaaacctgggatagt
caattcaatctgtcagatgcctctatcacacagcccttgaatgttgtggtctggtctcct
tgtgggcaattcctggcagctggaagtgtggatgggaatatagtggtgtggaatgtggaa
acccagcagtgcatagagaggatgaagcatgagaaaaaatactcaatttgtggactggca
tggcaccctaaatataagcaaattgcttacacagacactgaaggaaatctggggctgttg
gaaaatgttggtgatgtagagaagccaaatgacaaggttgccagtgcagtggccaaagac
tacaatgatctgtttgatggagatgatgatgattatttaaatggggatatggttgaacca
ccttcttccccaaaaactggagataatgaggatgatgctgatgaacttgtgcaaccccca
ggccatgtgagacgggcagtgattgatgatgatgatgataactcactagatattgggttg
ataaaagctggttctggtcttcttgagaaggaggattatggtgatgatcagactggtggc
ttttcagctttgccaccatcatctacacaacagcctttgtatgatgggccaatgccaacc
cccaggcaaaagcccttccagtctggctccactcctgtacacctcatgcatcgattcatg
gtgtggaactcggttgggatcattcgctgctacaacgacgagcaggacaatgccatcgac
atcgagttccacgacacctctgtgcatcatgccacacacctccccaactccctgagccac
accatggctgacctctctgctgaagccattttgctggcctgtgagagtacagaggaactt
gcgagcaagctccactgcatccattttggctcctgggataccaacaaggagtggaccgtg
gatatgccaaaggatgaagagattgaggccatctgtctgggtcagggctgggctgcctgt
gccaccactgccctgctggttcgtgtgttcacagttgggggtgttcagaaagagatcttc
agcctcccaggccctgtggtggccatggcaggacatggagagcagctgatggttgtttat
cacagaggtactgggtttgatggggaccagtgccttggggtacagctgatggagttagga
atgaagaaaagacaaattttgcatggagatcccctttcccttacaaggagatcctatttg
atgtgggttggattctctgctgaaggtaccccttgttacgtggattctgagggaattgtg
cggatgctgaaccgaggacttgggaacacttggattccagtgtgcaacaccagagagcat
tgcaaagggaaatatgatcattactgggtcgttggcatccatgaaaatccccagcagctc
aggtgcattccctgtaaaggatctcgcttccctcccaccctgccacgacctgctgtagca
atcctgccttttaaacttccttattgtcaagttgcaacagagaagggacagatggaggaa
cagtactggcgttctattctatttcatggccacgtggattacttgtcaaaaaatggctat
gaatttgatgaaaatgctaaaaatcaggtagtgaaagaacagcaggaacttctaatgaag
ctatttgctctttcctgtaagctggagcgcgagttccgctgcgtggagctggctgacctc
atgacccccagcgtggtgaacttggccatcaaatactcctcccgctcccgcaggctgaac
ttagcccagcgcctcagcgaggtggctgtggaaaaagcctcagagctggcagcagcagca
caggaacatgaagaggaggaagaggctttccaacaccactccaatgctggttacagcagg
tctgccacgaactggggtcagctgccaggcaggaatgttcagcaggacgaagaagtggaa
aatgctgaagaaactgatgcctgtgaggaagcagaagaaaccccagaagtgcagcaagag
aaagagccagatcatttctccaaaggtgtcacctcagcagaggtgatcactccaaagtct
gctctggttgcatccagcagccgaggacgagtgaatccatttaaggtgtcatccagcaaa
aaggacccagtggtgccctcagcaaatattttagacaatatgaccaaatactcaaagaaa
acatctttgcttggcagtcgagctgtaaacaagcagaaccctccagttataaagcctctg
actcccaaacccaagaccaagcaggctttagcagcttccttcttccagccccgcacacct
gcaactaatcctgctgaaaaaacagtggaagaaagagaagaaaaagcaggaaacgagtcc
caggaagtcaaagtcactgcacaggaaaacactgaaaacagaagaccaatgacaggtttc
cagatgtggctaaaggagaacagaacaaacattttgacagataatcctgacctgaatgaa
gcagaagtaataaaagaaggcatgagtcgatttagaatgctgacatcagaggaaaggatg
gtgtggactgagaaagcaaaaggaggaagagtcgatgactcagcagaagacaaaaagagg
aagcgtcccacggctgaggaagatgaagtggaaaacagccaggagcagaactccaaggac
acaaatgtatccaagaaatccaagcctttggatgcatccacaaacaacagattgtcagct
tttgccttcaagcagagctaa
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