Sylvia atricapilla (blackcap): 136362782
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Entry
136362782 CDS
T10263
Symbol
RTN1
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136362782 (RTN1)
03036 Chromosome and associated proteins [BR:
sati03036
]
136362782 (RTN1)
Membrane trafficking [BR:
sati04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136362782 (RTN1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136362782 (RTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
DUF4736
ArsP_1
Motif
Other DBs
NCBI-GeneID:
136362782
NCBI-ProteinID:
XP_066177702
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Position
6:complement(39073389..39190671)
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AA seq
759 aa
AA seq
DB search
MSAPPDPQELLLAGTGVHWAADGANQYATGAPLRDGDGAQQREQPGFGSAREHPPVTMAT
ASPGVTGSSHLFDYGSTANGGDNSFYTSLISDVHYTTPRDSTYFTGIYQQENTPISCSGS
TEGFNALGHPVQDVTGFESRGLFSSDSGIEMTPAESTEVDKTLADPMKVEAYKYMDMSRS
EEIKYQEKHDSDSEDESPDLSDKYRGTPVGSNHAAEPPRTPSESTKAAKEQDLLEDRKPG
GQHSPSVATSPVKITLTETESPKEAASKEPSPTQPDTGLKPSHEVVPTVTVSEPEDDSPG
SVTPPSSGTEPSGSESQGKGSLSEDELISAIKEAKSFSFEPPEAQRSPAPPAEKRDQRAK
PGRAPSSSSHGDNEASSAESGDSEIELVSEDPLAAEEVLHSNYMTFSHVGGPPPSPASPS
IQYSILREEREAELDSELIIESCDASSASEESPKREQDSPLMKPKVMDIIKEENNPRADA
SEYEAGKMTESRMNRENLAESSSYLKSSFVAPKIGAEPPTSAVSTEELKERVILKKPIEE
TVVNQSKVSSKDFGKKSPLASFLLPFLNKQKAIDLLYWRDIKQTGIVFGSLLLLLFSLTQ
FSVVSVVAYLALAGLSATISFRIYKSVLQAVQKTDEGHPFKAYLEMEMNLSQDQIQKYTD
CLQLYVNSTVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFTLPV
VYDKYQAQIDQYLGLVRTHINTVVAKIQAKIPGAKRKAE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccgccggacccccaggagctgctgctggcgggcaccggggtgcactgggct
gcggacggggcgaaccagtacgcgactggggctccgctgcgggatggagatggggctcag
cagcgggaacagccgggattcggctccgccagggaacacccgcccgttaccatggcgact
gcatccccaggtgtcacaggctcatcacatctctttgactacggctccactgccaacgga
ggggacaactccttctacacctctctgatctccgatgtccactacaccaccccacgggac
tccacctatttcacgggcatctatcagcaggaaaacacccccatttcctgttcgggcagc
acggaggggtttaacgccctggggcatcctgttcaagacgtgactgggtttgaatcccgc
ggcttgtttagctcagactcgggaatagagatgactcctgcagagtccactgaagtcgac
aaaaccttagcagatcccatgaaagtagaagcttacaaatacatggacatgagtagatca
gaagaaataaagtaccaagaaaaacatgactctgactcagaagatgagagcccagacctt
agtgataagtaccggggaacacccgtggggtccaaccacgccgctgaacctccacggacg
ccttcggagagcacaaaggcagccaaggagcaagacctgctggaagacagaaagcctggg
ggtcagcacagtccctctgtggccacaagccccgtcaagatcacactcactgagacagaa
agccccaaggaagctgccagcaaagagccgagtccgacccagccggacactggcctgaag
ccgagccatgaggtggtgccgacggtgacggtgtcggagccggaagatgacagcccagga
tctgtcacaccaccctcctctggcacagaaccgtccggctcagagtcgcagggcaaaggc
agcctgtcggaggacgaactcatcagcgccatcaaggaagccaagagcttttccttcgag
cccccggaggcgcagcggtctccagcccctccggcggagaagcgagaccagcgggccaag
cccggccgcgctccctcctcctcctcgcacggcgacaacgaagccagcagcgccgagtcc
ggcgactcggagatcgagctggtctcggaggaccccctggccgccgaggaggtgctgcac
tccaactacatgaccttcagccacgtcggggggccccctccgtcgcccgcctcgccctcc
atccagtacagcatcctgcgggaggagcgggaggccgagctcgacagcgagctcatcatc
gagtcctgcgacgcctcatcggcctccgaggagagccccaagagggagcaggactcccct
ctgatgaagcccaaggtcatggacattatcaaggaagagaacaacccgcgcgccgacgcc
tcggagtacgaggccggtaagatgacggagagcaggatgaacagggaaaacctggccgag
tcctcgtcctacctgaaaagctcctttgtggcaccaaaaataggcgcggagcccccgacc
tctgccgtcagcaccgaggagctgaaggaaagagtaatcctgaagaaacccatcgaagaa
acagttgttaaccaaagtaaagtgtcttccaaggactttggcaaaaaaagtccgttggct
tcgttcctactgccgtttttaaataagcagaaagctatcgacctgttgtactggcgtgac
atcaagcagacggggatcgtgttcggcagcctcctgctgctgctcttctccctgacccag
ttcagcgtcgtcagcgtcgtcgcctacctggccctggccggcctctcggccaccatcagc
ttcagaatctacaaatccgtcctacaggctgtgcagaagacggacgagggccaccccttc
aaagcctacttggagatggagatgaatctttcacaggaccagatccagaaatacacagat
tgtctccagctatacgtcaacagcacagtcaaagagctgaggagactctttctcgttcag
gaccttgtggattctttaaaatttgcagtactaatgtggctgctgacttacgtgggagcc
ctcttcaatggcctgactcttctgataatggctgtggtgtctatgtttactctccctgtt
gtatatgacaagtaccaggcacagattgatcagtacttggggctggtgcggacccacata
aacacggtcgtggcaaagattcaagctaaaatcccaggtgctaagagaaaggcagagtaa
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